Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq5484 170 4e-40 >seq5484 Length=7481 Score = 170 bits (188), Expect = 4e-40 Identities = 237/326 (73%), Gaps = 7/326 (2%) Strand=Plus/Plus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70 ||||| |||||||||| |||||| ||| | || ||||| ||| ||||| | | Sbjct 4791 AGGGGAGTGAAATAGAACCTGAAACCGTGTGCTTACAAAAAGTCAGAGCCCGTTTTAGGG 4850 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCA-GCGAGGTTAAG 129 |||| ||||||||||||| | ||||| || ||||||| ||| || || |||||||| Sbjct 4851 GTGATGGCGTGCCTTTTGTAGAATGAACCGGCGAGTTA--CGTTCCCGTGCAAGGTTAAG 4908 Query 130 GGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACG-AGTTGGTGGC 188 | | || ||| ||||| || ||||||||| || || |||||||| ||| |||| Sbjct 4909 G--TGAAGAGCCGG-AGCCGCAGCGAAAGCGAGTCTGAATAGGGCGACATAGTACGTGGA 4965 Query 189 GCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGAT 248 ||||| ||||||| ||||||||||| | |||| ||||| |||||||| || | Sbjct 4966 CGTAGACCCGAAACCGGGTGATCTACCCCTGTCCAGGGTGAAGGTGCGGTAACACGCACT 5025 Query 249 GGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAG 308 ||||| ||||||| | |||||||| | |||||| | |||||| || |||| Sbjct 5026 GGAGGCCCGAACCCACGCATGTTGAAAAATGCGGGGATGAGGTGGGGGTAGCGGAGAAAT 5085 Query 309 GCCAATCAAACTGGGAAATAGCTCGT 334 |||||| |||| ||| |||||| || Sbjct 5086 TCCAATCGAACTCGGAGATAGCTGGT 5111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972736009216