Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq5484 385 1e-104 seq4721 80.6 7e-13 >seq5484 Length=7481 Score = 385 bits (426), Expect = 1e-104 Identities = 332/409 (81%), Gaps = 3/409 (1%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||||||| | |||| |||||||||||||||||||||||||||||||||||||||| || Sbjct 2886 TACCTGAGAAGAAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 2945 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 ||||||| |||||||| ||||||||||||| ||||||||||| | |||| | ||||| Sbjct 2946 AAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCAGGCGGTCATTTAAGTCTGGTGT 3005 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 |||||| ||||| |||| ||| | ||| | | |||| |||| ||||| ||| Sbjct 3006 TTAATCCCGGGGCTCAACCCCGGA-TCGCACTGGAAACTGGGTGACTTGAGTGCAGAAGA 3064 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| Sbjct 3065 GGAGAGTGGAATTCCACGTGTAGCGGTGAAATGCGTAGATATGTGGAGGAACACCAGTGG 3124 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 ||||||| | | ||||| | ||||||||| | || |||||||||||||||||||||| Sbjct 3125 CGAAGGCGACTCTCTGGGCTGTAACTGACGCTGAGGCGCGAAAGCGTGGGGAGCAAACAG 3184 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTT--A 360 |||||||||||||||||||||||||| |||||||| |||| |||| ||| ||| | Sbjct 3185 GATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAGTGCTAGGTGTTAGGGGTTTCGA 3244 Query 361 CTTCCTTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 ||||||| || || |||| | | ||| ||||||||||| ||| Sbjct 3245 TACCCTTGGTGCCGAAGTTAACACATTAAGCACTCCGCCTGGGGAGTAC 3293 >seq4721 Length=34754 Score = 80.6 bits (88), Expect = 7e-13 Identities = 74/91 (81%), Gaps = 2/91 (2%) Strand=Plus/Plus Query 238 AATGGCGAAGGCAGCCCCCT-GGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGC 296 ||||||||||||| ||| || | |||| ||||||| | | | ||||| || |||| ||| Sbjct 23705 AATGGCGAAGGCAACCCTCTATGTATAA-ACTGACGTTAAGGGACGAAGGCTTGGGTAGC 23763 Query 297 AAACAGGATTAGATACCCTGGTAGTCCACGC 327 || ||||||||||||||| |||||||| || Sbjct 23764 GAATAGGATTAGATACCCTAGTAGTCCAGGC 23794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289515170112