Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq5484 434 2e-119 >seq5484 Length=7481 Score = 434 bits (480), Expect = 2e-119 Identities = 324/378 (86%), Gaps = 15/378 (4%) Strand=Plus/Minus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 || || |||||||||| || |||| |||||||||| ||| | |||||||||| |||||| Sbjct 6329 TAACCTGCATCTTCACAGGTATTAAAATTTCACCGGATCTCTCGTTGAGACAGCGCCCAA 6270 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 |||||||||| |||||||||||| ||| ||||| ||||||||||||||||||||||||| Sbjct 6269 GTCGTTACGCCATTCGTGCGGGTCAGAATTTACCTGACAAGGAATTTCGCTACCTTAGGA 6210 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTC-GATTGCT-CTA 178 |||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| ||| Sbjct 6209 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCGGTTCACAGCTTCGGATTGCTCCTA 6150 Query 179 ACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGA 238 || | ||||||||||||||||||||||||||||||||||| | ||||| ||| ||| || Sbjct 6149 ACCGCTCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCCCGTATACTTCGCCTTACGG 6090 Query 239 CTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC---- 294 ||| ||| | ||||||||||||| ||||||||||||||||||| ||| |||||||| Sbjct 6089 CTTCGCACAGACCTGTGTTTTTGCTAAACAGTCGCTTGGGCCTTTTCACTGCGGCCCCCT 6030 Query 295 --TGTCATAGACA-------GGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAG 345 || || ||| ||||||||||||||| |||||||||||||||||||||||| Sbjct 6029 CGTGCTATTCACACTACCGGGGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAG 5970 Query 346 TTCCTTAACAATAGTTCT 363 ||||||||| | |||||| Sbjct 5969 TTCCTTAACGAGAGTTCT 5952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062330115328