Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq5484 605 8e-171 >seq5484 Length=7481 Score = 605 bits (670), Expect = 8e-171 Identities = 437/499 (88%), Gaps = 7/499 (1%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||||||||||||||| |||||| || Sbjct 3291 TACGGTCGCAAGACTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCAGTGGAGTAT 3350 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCC-TCTGACCCCT 119 |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| | Sbjct 3351 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAGGTCTTGACATCCCTCTGACCGGT 3410 Query 120 CTAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGT-GACAGGTGATGCATGGTTGTCGTC 178 |||||| | ||||| |||||| |||||| |||||||| ||||||||||||||| Sbjct 3411 ACAGAGATGTACCTTTCC--TTCGGG--ACAGAGGAGACAGGTGGTGCATGGTTGTCGTC 3466 Query 179 AGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTT 238 |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 3467 AGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGATCTTAGTT 3526 Query 239 GCCATCA-TTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGG 297 |||| || || | ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 3527 GCCAGCACTTCGGGTGGGCACTCTAAGGTGACTGCCGGTGACAAACCGGAGGAAGGTGGG 3586 Query 298 GACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAA 357 || ||||||||||||||||||||||||||| |||||||||||||| ||||||||| | Sbjct 3587 GATGACGTCAAATCATCATGCCCCTTATGACCTGGGCTACACACGTACTACAATGGCCGG 3646 Query 358 TACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGA 417 ||||| |||||| ||||||||||||| | | ||||| | |||| | |||||||||||| Sbjct 3647 TACAACGGGCAGTGAAACCGCGAGGTGGAACGAATCCTAAAAAGCCGGTCTCAGTTCGGA 3706 Query 418 TTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGC 477 ||| || |||||||||| || |||||| ||||| ||||||||||| ||||||||||| Sbjct 3707 TTGCAGGCTGCAACTCGCCTGCATGAAGTCGGAATTGCTAGTAATCGCGGATCAGCATGC 3766 Query 478 TACGGTGAATACGTTCCCG 496 ||||||||||||||||| Sbjct 3767 CGCGGTGAATACGTTCCCG 3785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503901066880