Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq5484 257 4e-66 >seq5484 Length=7481 Score = 257 bits (284), Expect = 4e-66 Identities = 286/376 (76%), Gaps = 27/376 (7%) Strand=Plus/Minus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||| ||||||| |||||| | ||| |||||||||||| || |||||||||||||| Sbjct 2833 CTTTACGATCCGAAAACCTTCAT-CACTCACGCGGCATTG-CTCCGTCAGGCTTTCGCCC 2776 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 |||| || |||||| ||||||||||||||||||||||||| |||||||||||| |||| Sbjct 2775 ATTGCGGAAGATTCCCTACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAG 2716 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| | ||||| |||||||| | | |||| ||||||||||||||||||| ||||| || Sbjct 2715 TGTGGCCGATCACCCTCTCAGGTCGGCTACGCATCGTCGCCTTGGTGAGCCGTTACCCCA 2656 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAG-GCCCGA-AGGTCC----- 233 ||||||||||||| || | |||| |||| | |||| | | || | ||| Sbjct 2655 CCAACTAGCTAATGCGCCGCAGGCCCATC------CCCAAGTGACAGATTGCTCCGTCTT 2602 Query 234 -CCTGCTTTCTCCCGTAG-------GACGTATGCGGTATTAGCGTCCGTTTCCGAACGTT 285 || | ||||| | | || | ||| |||||||||| ||||||||| ||| Sbjct 2601 TCCAGTTTTCTTCAGGAGAAGAAAACAACTATTCGGTATTAGCTACCGTTTCCGGTAGTT 2542 Query 286 ATCCCCCACTACCAGGCAGATT-CCTAGGCATTACTCACCCGTCCGCCGCTCTCAA---G 341 |||| || ||||| || |||| | |||||||||||||||||||| | | | Sbjct 2541 GTCCCAAGCTTGAGGGCAGGTTGCCTACGTGTTACTCACCCGTCCGCCGCTAACTATCGG 2482 Query 342 AGAAGCAAGCTTCTCT 357 |||||||||||||||| Sbjct 2481 AGAAGCAAGCTTCTCT 2466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071929483840