Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq5484 315 3e-83 >seq5484 Length=7481 Score = 315 bits (348), Expect = 3e-83 Identities = 410/557 (74%), Gaps = 30/557 (5%) Strand=Plus/Minus Query 53 GGCATTCGGAGTTTGGTTGATTTCGGTAAGC-TTGTGGGCCCCCTAGACCATCCAGTGCT 111 ||||||||||||||| ||| | ||||| | ||| ||||||| | | ||| |||||| Sbjct 5223 GGCATTCGGAGTTTGACTGAGCTTGGTAACCCTTGCGGGCCCCGCACCCAATC-AGTGCT 5165 Query 112 CTACCTCCGGGAAGAAACACG----CGACGCTGCACCTAAATGCATTTCGGGGAGAACCA 167 |||||||| | || | ||| ||| |||||| |||||||||||||||| Sbjct 5164 CTACCTCC---ACGACTCTGTTTTCCGAGGCTAGCCCTAAAGCTATTTCGGGGAGAACCA 5108 Query 168 GCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCA 227 |||||| | |||| |||||| |||| || ||| || || |||||||| || |||||| Sbjct 5107 GCTATCTCCGAGTTCGATTGGAATTTCTCCGCTACCCCCACCTCATCCCCGCATTTTTCA 5048 Query 228 ACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAG 287 || | |||||||||| |||||| || ||||| ||||| |||| || || ||| Sbjct 5047 ACATGCGTGGGTTCGGGCCTCCAGTGCGTGTTACCGCACCTTCACCCTGGACAGGGGTAG 4988 Query 288 ATCACTTCGCTTCGGGTCTTGATCGTGCCACTCA-TA---CGCCCTATTCGGACTCGCTT 343 ||||| | ||||||||| ||| |||| | || |||||||||| ||||||||| Sbjct 4987 ATCACCCGGTTTCGGGTCTA---CGT-CCACGTACTATGTCGCCCTATTCAGACTCGCTT 4932 Query 344 TCGCTACGGCTACCCCACA-CGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCAT 402 ||||| ||||| | | | | ||||||| || |||| || ||||| || |||| Sbjct 4931 TCGCTGCGGCTCCGGCTCTTCACCTTAACCTTGCACGGGAACGTAA-CTCGCCGGTTCAT 4873 Query 403 TCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTA 462 ||| ||||||||||||| ||||| ||||||| | |||| ||| ||||| Sbjct 4872 TCTACAAAAGGCACGCCATCACC-----CCTAAAACGG------GCTCTGACTTTTTGTA 4824 Query 463 GGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCA 522 ||||| |||||||||| |||||||||||||| | ||||| |||||||||||||||||| Sbjct 4823 AGCACACGGTTTCAGGTTCTATTTCACTCCCCTTCCGGGGTGCTTTTCACCTTTCCCTCA 4764 Query 523 CGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAG 582 ||||||| | | ||||||||| | | | ||||||||| ||| | | |||||| ||| | Sbjct 4763 CGGTACTGCTTCACTATCGGTCGCTAGGAAGTATTTAGCCTTGGCAGATGGTCCTGCCGG 4704 Query 583 ATTCACACGAAATTTCA 599 ||||| ||| ||||| Sbjct 4703 ATTCATACGGGGTTTCA 4687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817480438272