Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07-
28] 6,578 sequences; 35,996,854 total letters
Query= AAMG01001213.1
Length=600
Score E
Sequences producing significant alignments: (Bits) Value
seq5484 315 3e-83
>seq5484
Length=7481
Score = 315 bits (348), Expect = 3e-83
Identities = 410/557 (74%), Gaps = 30/557 (5%)
Strand=Plus/Minus
Query 53 GGCATTCGGAGTTTGGTTGATTTCGGTAAGC-TTGTGGGCCCCCTAGACCATCCAGTGCT 111
||||||||||||||| ||| | ||||| | ||| ||||||| | | ||| ||||||
Sbjct 5223 GGCATTCGGAGTTTGACTGAGCTTGGTAACCCTTGCGGGCCCCGCACCCAATC-AGTGCT 5165
Query 112 CTACCTCCGGGAAGAAACACG----CGACGCTGCACCTAAATGCATTTCGGGGAGAACCA 167
|||||||| | || | ||| ||| |||||| ||||||||||||||||
Sbjct 5164 CTACCTCC---ACGACTCTGTTTTCCGAGGCTAGCCCTAAAGCTATTTCGGGGAGAACCA 5108
Query 168 GCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCA 227
|||||| | |||| |||||| |||| || ||| || || |||||||| || ||||||
Sbjct 5107 GCTATCTCCGAGTTCGATTGGAATTTCTCCGCTACCCCCACCTCATCCCCGCATTTTTCA 5048
Query 228 ACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAG 287
|| | |||||||||| |||||| || ||||| ||||| |||| || || |||
Sbjct 5047 ACATGCGTGGGTTCGGGCCTCCAGTGCGTGTTACCGCACCTTCACCCTGGACAGGGGTAG 4988
Query 288 ATCACTTCGCTTCGGGTCTTGATCGTGCCACTCA-TA---CGCCCTATTCGGACTCGCTT 343
||||| | ||||||||| ||| |||| | || |||||||||| |||||||||
Sbjct 4987 ATCACCCGGTTTCGGGTCTA---CGT-CCACGTACTATGTCGCCCTATTCAGACTCGCTT 4932
Query 344 TCGCTACGGCTACCCCACA-CGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCAT 402
||||| ||||| | | | | ||||||| || |||| || ||||| || ||||
Sbjct 4931 TCGCTGCGGCTCCGGCTCTTCACCTTAACCTTGCACGGGAACGTAA-CTCGCCGGTTCAT 4873
Query 403 TCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTA 462
||| ||||||||||||| ||||| ||||||| | |||| ||| |||||
Sbjct 4872 TCTACAAAAGGCACGCCATCACC-----CCTAAAACGG------GCTCTGACTTTTTGTA 4824
Query 463 GGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCA 522
||||| |||||||||| |||||||||||||| | ||||| ||||||||||||||||||
Sbjct 4823 AGCACACGGTTTCAGGTTCTATTTCACTCCCCTTCCGGGGTGCTTTTCACCTTTCCCTCA 4764
Query 523 CGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAG 582
||||||| | | ||||||||| | | | ||||||||| ||| | | |||||| ||| |
Sbjct 4763 CGGTACTGCTTCACTATCGGTCGCTAGGAAGTATTTAGCCTTGGCAGATGGTCCTGCCGG 4704
Query 583 ATTCACACGAAATTTCA 599
||||| ||| |||||
Sbjct 4703 ATTCATACGGGGTTTCA 4687
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1817480438272
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |