Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq5484 196 1e-47 >seq5484 Length=7481 Score = 196 bits (216), Expect = 1e-47 Identities = 240/325 (74%), Gaps = 22/325 (7%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||| | || || ||| ||||||||||||||||| Sbjct 2801 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAGATTCCCTACTGCTGCCTCCCGTAG 2742 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||||| ||| |||||||| ||||||| || Sbjct 2741 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCCGATCACCCTCTCAGGTCGGCTACGCAT 2682 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||||| ||||||| || ||| | ||||||||| ||||| ||||| ||||||| | Sbjct 2681 CGTCGCCTTGGTGAGCCGTTACCCCACCAACTAGCTAATGCGCCGCAGGCCCATCCCCAA 2622 Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCCA----TCCTCTG---------AC-ATTATG 226 | || | | ||| || | | ||| || || | || | ||| Sbjct 2621 GTGACAGA---TTGCTC----CGTCTTTCCAGTTTTCTTCAGGAGAAGAAAACAACTATT 2569 Query 227 CGGTATTAGCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTT 286 |||||||||| ||||||| ||| | ||| || | |||||||||| ||||||| Sbjct 2568 CGGTATTAGCTACCGTTTCCGGTAGTTGTCCCAAGCTTGAGGGCAGGTTGCCTACGTGTT 2509 Query 287 ACTCACCCGTCCGCCACTAAGCTAT 311 ||||||||||||||| |||| |||| Sbjct 2508 ACTCACCCGTCCGCCGCTAA-CTAT 2485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998334325248