Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq5484 300 4e-79 >seq5484 Length=7481 Score = 300 bits (332), Expect = 4e-79 Identities = 313/402 (78%), Gaps = 9/402 (2%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| |||||||||||||||| ||||||| |||| | || ||| | | | | Sbjct 5673 CGACTACGCCTTTCGGCCTCGCCTTAGGTCCCGACTTACCCTGAGCGGACGAGCCTTCCT 5614 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119 | ||||||||| | |||||||| ||||| ||| || || ||||||| || Sbjct 5613 CAGGAACCCTTAGGCTTTCGGCGGATCAGATTCTCACTGATCTTTTCGTTACTCATACCG 5554 Query 120 GCATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACACGA 179 ||||||||||| | || | |||| | | | | || || ||||| | || | || | Sbjct 5553 GCATTCTCACTTGTATAATGTCCAGCGCTCCTT-ACGGTACACCTTCAACCCTTATACAA 5495 Query 180 CGCTCCCCTACCC---AACCACA-CAGGTTGCCACAGCTTCGGCGGATAACTTAAGCCCC 235 ||||||||||||| | || | || |||| |||||||| || | || |||||| Sbjct 5494 CGCTCCCCTACCCCTGATGCAAAGCATCAAGCCATAGCTTCGGTGG-TGTGTTTAGCCCC 5436 Query 236 GCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGATG 295 | |||||| ||||||| || ||||| ||||||||||||||||||||||||||||| | || Sbjct 5435 GTTACATTTTCGGCGCAGAGTCACTCGACCAGTGAGCTATTACGCACTCTTTCAATGGTG 5376 Query 296 GCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAGTC 355 |||||||| |||||||| |||||||||||| ||||||||||||||||||||||| | | Sbjct 5375 GCTGCTTCTAAGCCAACATCCTGGTTGTCTGTGCAACTCCACATCCTTTCCCACTTAA-C 5317 Query 356 AC-CACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCT 396 || ||||| ||| |||||||||||| |||||||||||||||| Sbjct 5316 ACACACTTGGGGACCTTAGCTGATGGTCTGGGCTGTTTCCCT 5275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177522537472