Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq5484 381 9e-104 >seq5484 Length=7481 Score = 381 bits (422), Expect = 9e-104 Identities = 249/274 (91%), Gaps = 0/274 (0%) Strand=Plus/Minus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| ||||||| |||||||||| |||||| |||||||||||| || ||||| ||||| Sbjct 7061 GAGGGGGGCTTCACGCTTAGATGCTTTCAGCGCTTATCCCTTCCGTACATAGCTACCCAG 7002 Query 62 CTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTAC 121 | ||| | |||| | ||||||||| |||||| ||| |||||||||||||||||||||| Sbjct 7001 CGGTGCTCCTGGCGGAACAACTGGTACACCAGCGGTACGTCCATCCCGGTCCTCTCGTAC 6942 Query 122 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGC 181 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct 6941 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACAGATAGGGACCGAACTGTCTCAC 6882 Query 182 GACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 241 ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct 6881 GACGTTCTGAACCCAGCTCGCGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 6822 Query 242 TACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 |||||||||||||||||| || |||||||||||| Sbjct 6821 TACTTCAGCCCCAGGATGCGATGAGCCGACATCG 6788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780750244008