Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq5484 257 4e-66 >seq5484 Length=7481 Score = 257 bits (284), Expect = 4e-66 Identities = 314/424 (74%), Gaps = 16/424 (4%) Strand=Plus/Minus Query 4 CTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63 |||||| | ||||| ||||| ||| |||||||||| ||| | |||||||| ||||||| Sbjct 2833 CTTTACGATCCGAAAACCTTCATCACTCACGCGGCATTGCTCCGTCAGGCTTTCGCCCAT 2774 Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123 || | || |||||| ||||||||||||||||||||||||| |||||||||||| |||||| Sbjct 2773 TGCGGAAGATTCCCTACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTG 2714 Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCC 183 |||| | ||| |||||||| | |||| | |||||||||| |||| ||| ||||||| || Sbjct 2713 TGGCCGATCACCCTCTCAGGTCGGCTACGCATCGTCGCCTTGGTGAGCCGTTACCCCACC 2654 Query 184 AACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAG---GCCCGAAGGTCCCCCTCT 240 ||||||||||| | || ||||| ||||| || || | | || | | Sbjct 2653 AACTAGCTAATGCGCCGCAGGCCCATCCCCAAGTGACAGATTGCTCCGTCTTTCCAGT-T 2595 Query 241 TTGGTCTTGCGACG-------TTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCC 293 || || | || | ||| |||||||||| ||||||||| || ||| |||| Sbjct 2594 TTCTTCAGGAGAAGAAAACAACTATTCGGTATTAGCTACCGTTTCCGGTAGTTGTCCCAA 2535 Query 294 TCCATCAGGCA-GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCA 352 | |||| ||| || | ||||||||||||||||| || | || || |||| Sbjct 2534 GCTTGAGGGCAGGTTGCCTACGTGTTACTCACCCGTCCGCCGCTAACTATCGGAGAAGCA 2475 Query 353 AGCT--GCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATC 410 |||| |||| || ||| ||||||||||||| |||||| |||||||||||||| | Sbjct 2474 AGCTTCTCTTCAAGT--CCGCTCGACTTGCATGTATTAGGCATGCCGCCAGCGTTCGTCC 2417 Query 411 TGAG 414 |||| Sbjct 2416 TGAG 2413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222319590528