Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq5484 379 6e-103 >seq5484 Length=7481 Score = 379 bits (420), Expect = 6e-103 Identities = 394/513 (77%), Gaps = 39/513 (8%) Strand=Plus/Plus Query 23 AGCGGCGGACGGGTGAGTAACGCGTGGGTAACCTGCCCTGTACACACGGATAACATACCG 82 ||||||||||||||||||||| ||| || |||||||||| | ||| ||| ||||| Sbjct 2491 AGCGGCGGACGGGTGAGTAACACGTAGGCAACCTGCCCTCAAGCTTGGGACAAC-TACCG 2549 Query 83 AAA--GGTATGCTAATACGAGATAATATACTTTTATCGCATGGT-AGAAGTATCAA---- 135 || |||| |||||||| ||| | | ||| || | || | || | || Sbjct 2550 GAAACGGTA-GCTAATACCGAATAGT-TGTTTTCTTCTCCTGAAGAAAACTGGAAAGACG 2607 Query 136 -AGC--TCCGGCGGTACAGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGC 192 ||| || | | | |||| | || ||| | |||||||||||||| ||||||||| Sbjct 2608 GAGCAATCTGTCACTTGGGGATGGGCCTGCGGCGCATTAGCTAGTTGGTGGGGTAACGGC 2667 Query 193 TTACCAAGGCGACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGA 252 | |||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||| Sbjct 2668 TCACCAAGGCGACGATGCGTAGCCGACCTGAGAGGGTGATCGGCCACACTGGGACTGAGA 2727 Query 253 CACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCT 312 ||||| ||| ||||||||||||||||||||| |||||| || | |||||||| ||||||| Sbjct 2728 CACGGCCCAGACTCCTACGGGAGGCAGCAGTAGGGAATCTTCCGCAATGGGCGAAAGCCT 2787 Query 313 GATGCAGCAACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGG 372 || | ||||| |||||||||| |||||||| ||||| |||||||||||||| || || Sbjct 2788 GACGGAGCAATGCCGCGTGAGTGATGAAGGTTTTCGGATCGTAAAGCTCTGTTGCCAGGG 2847 Query 373 AAGA-------------TAA------------TGACGGTACTTGAGGAGGAAGCCCCGGC 407 |||| ||| ||||||||| |||| || |||||||||| Sbjct 2848 AAGAACGCTTGGGAGAGTAACTGCTCTCAAGGTGACGGTACCTGAGAAGAAAGCCCCGGC 2907 Query 408 TAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGG 467 |||||||||||||||||||||||||||||||||||||| |||||| |||||||||| | | Sbjct 2908 TAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTGTCCGGAATTA-TTG 2966 Query 468 GGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 ||||||||| | ||| ||| ||| ||||||| Sbjct 2967 GGCGTAAAGCGCGCGCAGGCGGTCATTTAAGTC 2999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497501487872