Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07-
28] 6,578 sequences; 35,996,854 total letters
Query= AAMG01002183.1
Length=408
Score E
Sequences producing significant alignments: (Bits) Value
seq5484 412 8e-113
>seq5484
Length=7481
Score = 412 bits (456), Expect = 8e-113
Identities = 339/409 (83%), Gaps = 3/409 (1%)
Strand=Plus/Plus
Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60
||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2886 TACCTGAGAAGAAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 2945
Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGT 120
|||||| |||||||||| ||||||||||| | ||| ||| ||| ||||||| | ||
Sbjct 2946 AAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCAGGCGGTCATTTAAGTCTGGTGT 3005
Query 121 GAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGG 180
|| | ||||||||||||| | || | ||||||| | || |||||||| ||
Sbjct 3006 TTAATCCCGGGGCTCAACCCCGGATC-GCACTGGAAACTGGGTGACTTGAGTGCAGAAGA 3064
Query 181 GGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGG 240
|| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct 3065 GGAGAGTGGAATTCCACGTGTAGCGGTGAAATGCGTAGATATGTGGAGGAACACCAGTGG 3124
Query 241 CGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAG 300
|||||||| || |||| ||||||||||| ||||||| ||||||||||||||||||||||
Sbjct 3125 CGAAGGCGACTCTCTGGGCTGTAACTGACGCTGAGGCGCGAAAGCGTGGGGAGCAAACAG 3184
Query 301 GATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAA 360
||||||||||||||||||||||||||||||||||||| | |||||||| ||| | |
Sbjct 3185 GATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAGTGCTAGGTGTTAGGG-GTTTCG 3243
Query 361 GTGCTC-CGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
| | | ||||||| || ||| || |||| | ||| |||||||||||
Sbjct 3244 ATACCCTTGGTGCCGAAGTTAACACATTAAGCACTCCGCCTGGGGAGTA 3292
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203120853504
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |