Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq5484 288 3e-75 >seq5484 Length=7481 Score = 288 bits (318), Expect = 3e-75 Identities = 362/485 (75%), Gaps = 13/485 (3%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGACA--GTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59 |||||| ||| ||||||||| || ||| |||||||||||||| ||||||||||| Sbjct 4935 CGAGTCTGAATAGGGCGACATAGTACGTGGACGTAGACCCGAAACCGGGTGATCTACCCC 4994 Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAA 119 || ||||| ||||||||||||||||||| ||||||| |||||||||| ||||||||||| Sbjct 4995 TGTCCAGGGTGAAGGTGCGGTAACACGCACTGGAGGCCCGAACCCACGCATGTTGAAAAA 5054 Query 120 TTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 179 | ||||||||| || |||||| || |||| | || | |||| ||| |||||||||||| Sbjct 5055 TGCGGGGATGAGGTGGGGGTAGCGGAGAAATTCCAATCGAACTCGGAGATAGCTGGTTCT 5114 Query 180 CTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCACCATC--GGGGGTAGAGCACTGTTA 237 | |||||| |||||| ||||| | || || || |||||||||||| | Sbjct 5115 CCCCGAAATAGCTTTAGGGCTAGCCTCGGAAAACAGAGTCGTGGAGGTAGAGCACTGAT- 5173 Query 238 TGGCTAGGGGGTCATTGCGACTTACCAAAC-CATTGCAAACTCCGAATGCGCATCAGTTT 296 ||| | |||| | | ||||||| | || | |||||||||||||| ||| || | Sbjct 5174 TGGGTGCGGGGCCCGCAAGGGTTACCAAGCTCAGT-CAAACTCCGAATGC-CAT-AGACT 5230 Query 297 TAC-CGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGA 355 ||| ||||||| || || |||||||| ||| | | | ||| || | || || Sbjct 5231 TACTTCCGGGAGTCAGACAGTGAGTGCTAAGATCCATTGTCAAAAGGGAAACAGCCCAGA 5290 Query 356 CTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGA 415 | ||||||||||| ||| || || | ||||| | || || || |||| ||| Sbjct 5291 CCATCAGCTAAGGTCCCCAAGTGTGTGTTAAGTGGGA--AAGGATGTGGAGTTGCACAGA 5348 Query 416 CAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAG 475 || | ||||||||||||| |||||||||| |||| ||||||||||||| |||||||| | Sbjct 5349 CAACCAGGATGTTGGCTTAGAAGCAGCCA-CCATTGAAAGAGTGCGTAATAGCTCACTGG 5407 Query 476 TCGAG 480 ||||| Sbjct 5408 TCGAG 5412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689488858112