Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07-
28] 6,578 sequences; 35,996,854 total letters
Query= AAMG01002193.1
Length=560
Score E
Sequences producing significant alignments: (Bits) Value
seq5484 288 3e-75
>seq5484
Length=7481
Score = 288 bits (318), Expect = 3e-75
Identities = 362/485 (75%), Gaps = 13/485 (3%)
Strand=Plus/Plus
Query 2 CGAGTCCGAACAGGGCGACA--GTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59
|||||| ||| ||||||||| || ||| |||||||||||||| |||||||||||
Sbjct 4935 CGAGTCTGAATAGGGCGACATAGTACGTGGACGTAGACCCGAAACCGGGTGATCTACCCC 4994
Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAA 119
|| ||||| ||||||||||||||||||| ||||||| |||||||||| |||||||||||
Sbjct 4995 TGTCCAGGGTGAAGGTGCGGTAACACGCACTGGAGGCCCGAACCCACGCATGTTGAAAAA 5054
Query 120 TTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 179
| ||||||||| || |||||| || |||| | || | |||| ||| ||||||||||||
Sbjct 5055 TGCGGGGATGAGGTGGGGGTAGCGGAGAAATTCCAATCGAACTCGGAGATAGCTGGTTCT 5114
Query 180 CTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCACCATC--GGGGGTAGAGCACTGTTA 237
| |||||| |||||| ||||| | || || || |||||||||||| |
Sbjct 5115 CCCCGAAATAGCTTTAGGGCTAGCCTCGGAAAACAGAGTCGTGGAGGTAGAGCACTGAT- 5173
Query 238 TGGCTAGGGGGTCATTGCGACTTACCAAAC-CATTGCAAACTCCGAATGCGCATCAGTTT 296
||| | |||| | | ||||||| | || | |||||||||||||| ||| || |
Sbjct 5174 TGGGTGCGGGGCCCGCAAGGGTTACCAAGCTCAGT-CAAACTCCGAATGC-CAT-AGACT 5230
Query 297 TAC-CGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGA 355
||| ||||||| || || |||||||| ||| | | | ||| || | || ||
Sbjct 5231 TACTTCCGGGAGTCAGACAGTGAGTGCTAAGATCCATTGTCAAAAGGGAAACAGCCCAGA 5290
Query 356 CTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGA 415
| ||||||||||| ||| || || | ||||| | || || || |||| |||
Sbjct 5291 CCATCAGCTAAGGTCCCCAAGTGTGTGTTAAGTGGGA--AAGGATGTGGAGTTGCACAGA 5348
Query 416 CAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAG 475
|| | ||||||||||||| |||||||||| |||| ||||||||||||| |||||||| |
Sbjct 5349 CAACCAGGATGTTGGCTTAGAAGCAGCCA-CCATTGAAAGAGTGCGTAATAGCTCACTGG 5407
Query 476 TCGAG 480
|||||
Sbjct 5408 TCGAG 5412
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1689488858112
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |