Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07-
28] 6,578 sequences; 35,996,854 total letters
Query= AAMG01002194.1
Length=319
Score E
Sequences producing significant alignments: (Bits) Value
seq5484 113 8e-23
>seq5484
Length=7481
Score = 113 bits (124), Expect = 8e-23
Identities = 178/251 (71%), Gaps = 17/251 (7%)
Strand=Plus/Plus
Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60
|| ||||| || |||||||| |||| | || ||||||||||||| | ||| |
Sbjct 4266 AGAGCACACGGAGGATGCCTAGGCGCTAGGAGCCGATGAAGGACGTGGCGAACAACGAAA 4325
Query 61 A-GCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGG 119
|| ||||||| | || || |||||||||| | | ||||||||||||||||| |
Sbjct 4326 CTGCCTCGGGGAGCT-GTAAGCAAGCTTTGATCCGGGGGTGTCCGAATGGGGAAACCCAG 4384
Query 120 CCCTTTGGGTCATTGCATG----------CTGAATACATAGGT-ATGCAAAGCGA-ACGC 167
| | |||| ||| | | |||||||||||||| ||||| || | ||
Sbjct 4385 C---TGGGGTAATTTCCAGTTACTCATAACTGAATACATAGGTTATGCAGAGGCATACCA 4441
Query 168 GGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAG 227
| ||||||||||||||||||| || ||||| ||||| ||| | |||||| |||||
Sbjct 4442 AGGGAACTGAAACATCTAAGTACCTTGAGGAAGAGAAAACAATAGTGATTCCGTCAGTAG 4501
Query 228 TGGCGAGCGAA 238
||||||||||
Sbjct 4502 CGGCGAGCGAA 4512
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 918339587648
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |