Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq5484 421 2e-115 >seq5484 Length=7481 Score = 421 bits (466), Expect = 2e-115 Identities = 437/569 (77%), Gaps = 18/569 (3%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 |||||||||| ||||||||||||||||||||| ||| || ||||| | ||||| || Sbjct 6653 TCGACTTGTAGGTCTCGCAGTCAAGCTCCCTTATGCCTTTGCACTCTTCGAATGATTTCC 6594 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 ||||| ||||||||||||||||||||||||||||| ||| ||||| | |||||||||| Sbjct 6593 AACCATTCTGAGGGAACCTTTGGGCGCCTCCGTTACTCTTTAGGAGG-CGACCGCCCCAG 6535 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 | ||||| |||||| | |||||||||| || ||| | || | |||||||| | | | Sbjct 6534 TCAAACTGCCCACCTGACACTGTCCCCGCACCGGATTACGGTACCAGGTTAGA-ACCTAG 6476 Query 181 -TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAG 239 |||| |||| ||||||| |||| | |||||| || ||| || ||| || Sbjct 6475 ATACGATCAGGGTGGTATCCCAACGGTGCCTCCACGCAAGCTGGCGCTCACGTTTCAAAG 6416 Query 240 TCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC 299 |||||||||||||| ||| | || ||| || ||||| |||||| ||| ||| ||| Sbjct 6415 GCTCCCACCTATCCTGTACAGATCGTACCCAAATTCAATATCAAGCTGCAGTAAAGCTCC 6356 Query 300 C-GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACC 358 ||||||||| |||| || |||| | ||| ||||||| || ||| | ||||||||| Sbjct 6355 ATGGGGTCTTTCCGTCTTGTCGCGGGTAACCTGCATCTTCACAGGTATTAAAATTTCACC 6296 Query 359 GGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACC 418 || || | ||||||||||| |||||||||||||||||||| |||| ||| ||||| Sbjct 6295 GGATCTCTCGTTGAGACAGCGCCCAAGTCGTTACGCCATTCGTGCGGGTCAGAATTTACC 6236 Query 419 CGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTT 478 ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct 6235 TGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTT 6176 Query 479 CAATTACCCGCCTCACACACCACGTGGTGTGCTC---ACGAGTCCTCTTAACCTTCCAGC 535 | || | || || || ||||| || ||| |||||||||||||| Sbjct 6175 CGGTTCACAGCTTC-----------GGATTGCTCCTAACCGCTCCCCTTAACCTTCCAGC 6127 Query 536 ACCGGGCAGGCGTCAGTCCGTATACCTCG 564 |||||||||||||||| |||||||| ||| Sbjct 6126 ACCGGGCAGGCGTCAGCCCGTATACTTCG 6098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702288016128