Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq2163 358 2e-94 seq3855 181 3e-41 >seq2163 Length=2997 Score = 358 bits (396), Expect = 2e-94 Identities = 359/466 (77%), Gaps = 0/466 (0%) Strand=Plus/Plus Query 2508 ATTGGTTAACAAATACCCAATCATCACTATCGAAGATGGTATGGACGAAAACGACTGGGA 2567 || |||| | |||||||| ||||||||||| ||||| |||||| |||| |||||||||| Sbjct 189 ATGGGTTGAGAAATACCCTATCATCACTATTGAAGACGGTATGTCCGAAGACGACTGGGA 248 Query 2568 CGGTTGGAAATCTCTTACTGAACGTCTTGGTGGTAAAGTTCAATTGGTTGGTGACGACTT 2627 |||||||||| || || ||| | || | ||||| ||| | |||||||| ||||| Sbjct 249 TGGTTGGAAATTGCTCACAGAAAAATTGGGAGACAAAGTACAACTCGTTGGTGATGACTT 308 Query 2628 CTTCGTAACTAACACTGCTTACCTTGAAAAAGGTATTGCAGAACACGCTGCTAACTCAAT 2687 |||||||| ||||| | || | | |||||| | |||| | |||||| || Sbjct 309 GTTCGTAACGAACACAGAGCGTCTGGGTAGAGGTATCGAAGAAGGTATCGGTAACTCCAT 368 Query 2688 CCTTATCAAAGTTAACCAAATCGGTACTTTGACTGAAACTTTTGACGCTATCGAAATGGC 2747 ||| ||||||||||||||||||||||| ||||||||||| ||||| || ||||||||||| Sbjct 369 CCTGATCAAAGTTAACCAAATCGGTACATTGACTGAAACATTTGATGCAATCGAAATGGC 428 Query 2748 GAAAGAAGCTGGATACACAGCAGTAGTATCACACCGTTCAGGTGAAACTGAAGATTCAAC 2807 ||| || |||||||| || ||| | || |||||||| ||||| | ||||| || Sbjct 429 TAAACGCGCAGGATACACTGCTGTAATCTCTCACCGTTCCGGTGAGTCCGAAGACAGCAC 488 Query 2808 AATCGCTGATATTGCAGTTGCAACTAACGCTGGTCAAATTAAGACAGGTTCATTGTCACG 2867 ||||||||| || || |||||||| ||||| |||||||| || || ||| | || || Sbjct 489 AATCGCTGACATCGCTGTTGCAACAAACGCGGGTCAAATCAAAACGGGTGCTCCTTCCCG 548 Query 2868 TACTGACCGTATTGCTAAATACAACCAATTGCTTCGTATCGAAGACCAACTTGGTGAAGT 2927 ||| |||||||| || || |||||||||||||| || ||||| || ||||| |||||| | Sbjct 549 TACAGACCGTATCGCGAAGTACAACCAATTGCTCCGCATCGAGGATCAACTGGGTGAACT 608 Query 2928 TGCAGAATACCGTGGTTTGAAATCATTCTACAACTTGAAAAAATAA 2973 || ||||| |||| | ||| ||||||||| | ||||||||| Sbjct 609 GGCTCAATACAATGGTCTTAAAGGTTTCTACAACCTCAAAAAATAA 654 >seq3855 Length=348 Score = 181 bits (200), Expect = 3e-41 Identities = 247/345 (72%), Gaps = 0/345 (0%) Strand=Plus/Plus Query 1738 GAAGTTTACACTGAATCTGGTGCATTCGGTCGCGGTATGGTTCCTTCAGGAGCATCAACT 1797 ||||| ||| || || || ||| |||| |||| ||| || || || || ||||| ||| Sbjct 2 GAAGTATACCTGGAGTCCGGCGCAATCGGACGCGCTATCGTACCATCCGGTGCATCCACT 61 Query 1798 GGTGAACACGAAGCAGTAGAACTTCGTGATGGTGACAAAGCTCGTTACGGTGGTCTTGGT 1857 |||| |||||||| || || ||||| ||||| |||||| | |||||| ||| ||| Sbjct 62 GGTGCCCACGAAGCCGTTGAGCTTCGCGATGGCGACAAATCCCGTTACCTGGGTAAAGGT 121 Query 1858 ACTCAAAAAGCAGTTGATAACGTAAACAACGTTATTGCTGAGCACATCATCGGATTCGAC 1917 || |||| ||| | ||||||||| | || ||| | | ||||| | || Sbjct 122 GTTCTGCAAGCTGTTAAAAACGTAAACGAAACAATCGCTCCAGAAGTAATCGGTATGGAT 181 Query 1918 GTACGTGATCAACAAGGTATTGACCGCGCAATGATCGCTCTTGACGGTACTCCAAACAAA 1977 | | ||||||| ||||| ||| |||||| || | || ||||| ||||||||| Sbjct 182 GCATTGGATCAACTGGGTATCGACAAATTGATGATCACTTTGGATGGTACGCCAAACAAA 241 Query 1978 GGTAAACTTGGTGCCAACGCTATTCTTGGTGTGTCTATCGCTGTAGCACGCGCAGCTGCT 2037 |||||||| ||||| ||||| || || | ||| || || |||||||| || ||||||||| Sbjct 242 GGTAAACTGGGTGCTAACGCAATCCTGGCTGTATCCATGGCTGTAGCTCGTGCAGCTGCT 301 Query 2038 GACTACCTTGAAGTTCCACTTTACAGCTACCTTGGCGGATTCAAC 2082 ||| || || | ||| | ||| ||||| |||||||||||| Sbjct 302 GACGCTCTGGACCTGCCATTGTACGTTTACCTGGGCGGATTCAAC 346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156026211255432