Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07-
28] 658 sequences; 37,414,534 total letters
Query= AAMG01000383.1
Length=435
Score E
Sequences producing significant alignments: (Bits) Value
seq286 385 1e-104
seq43 80.6 7e-13
>seq286
Length=4758
Score = 385 bits (426), Expect = 1e-104
Identities = 332/409 (81%), Gaps = 3/409 (1%)
Strand=Plus/Minus
Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62
||||||| | |||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct 4246 TACCTGAGAAGAAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 4187
Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122
||||||| |||||||| ||||||||||||| ||||||||||| | |||| | |||||
Sbjct 4186 AAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCAGGCGGTCATTTAAGTCTGGTGT 4127
Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182
|||||| ||||| |||| ||| | ||| | | |||| |||| ||||| |||
Sbjct 4126 TTAATCCCGGGGCTCAACCCCGGA-TCGCACTGGAAACTGGGTGACTTGAGTGCAGAAGA 4068
Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242
|| | ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct 4067 GGAGAGTGGAATTCCACGTGTAGCGGTGAAATGCGTAGATATGTGGAGGAACACCAGTGG 4008
Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302
||||||| | | ||||| | ||||||||| | || ||||||||||||||||||||||
Sbjct 4007 CGAAGGCGACTCTCTGGGCTGTAACTGACGCTGAGGCGCGAAAGCGTGGGGAGCAAACAG 3948
Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTT--A 360
|||||||||||||||||||||||||| |||||||| |||| |||| ||| ||| |
Sbjct 3947 GATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAGTGCTAGGTGTTAGGGGTTTCGA 3888
Query 361 CTTCCTTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409
||||||| || || |||| | | ||| ||||||||||| |||
Sbjct 3887 TACCCTTGGTGCCGAAGTTAACACATTAAGCACTCCGCCTGGGGAGTAC 3839
>seq43
Length=34756
Score = 80.6 bits (88), Expect = 7e-13
Identities = 74/91 (81%), Gaps = 2/91 (2%)
Strand=Plus/Minus
Query 238 AATGGCGAAGGCAGCCCCCTGGG-ATAACACTGACGCTCATGCACGAAAGCGTGGGGAGC 296
||||||||||||| ||| || | |||| ||||||| | | | ||||| || |||| |||
Sbjct 13524 AATGGCGAAGGCAACCCTCTATGTATAA-ACTGACGTTAAGGGACGAAGGCTTGGGTAGC 13466
Query 297 AAACAGGATTAGATACCCTGGTAGTCCACGC 327
|| ||||||||||||||| |||||||| ||
Sbjct 13465 GAATAGGATTAGATACCCTAGTAGTCCAGGC 13435
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1289591514432
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |