Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07- 28] 658 sequences; 37,414,534 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq286 109 6e-22 seq43 77.0 3e-12 >seq286 Length=4758 Score = 109 bits (120), Expect = 6e-22 Identities = 137/185 (74%), Gaps = 11/185 (6%) Strand=Plus/Minus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAA-TCACGGTT 80 ||||||| |||||| |||| || | || || ||||||||| | ||| || || || Sbjct 1228 CGCAAACCGACACAGGTAGGCGAGAAGAGAATTCTAAGGCGCGCGGAAGAACTCTCG-TT 1170 Query 81 AAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCC----TACCCAGAAA 136 |||||||| |||||| |||||| |||||||||||| || |||| || || ||| Sbjct 1169 AAGGAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGTGCCCCGGTAGTGTGAAT 1110 Query 137 TG-----GGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGT 191 | || || ||||| ||| ||| ||| || |||||||| |||||||||||| |||| Sbjct 1109 AGCACGAGGGGGCCGCAGTGAAAAGGCCCAAGCGACTGTTTAGCAAAAACACAGGTCTGT 1050 Query 192 GCCAA 196 || || Sbjct 1049 GCGAA 1045 >seq43 Length=34756 Score = 77.0 bits (84), Expect = 3e-12 Identities = 74/95 (78%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 32 CACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGGAACTAGG 91 |||| ||| | || || ||||| |||||| ||||| || | |||||||||| || Sbjct 28834 CACAAGTAAGCAAGTAGAGTATACAAAGGCGTTTGAGATAACAATCATTAAGGAACTCGG 28893 Query 92 CAAACTGACCCTGTAACTTCGGGATAAAGGGTCCC 126 |||| |||| ||||||||||||||||||| || || Sbjct 28894 CAAATTGACACTGTAACTTCGGGATAAAGTGTGCC 28928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531196613932