Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07-
28] 658 sequences; 37,414,534 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq286 300 4e-79
seq43 98.7 3e-18
>seq286
Length=4758
Score = 300 bits (332), Expect = 4e-79
Identities = 319/420 (76%), Gaps = 18/420 (4%)
Strand=Plus/Plus
Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60
||||| || |||||||||||||| ||| |||||||| | |||| || ||||||||
Sbjct 798 CGCGGGTAACCTGCATCTTCACAGGTATTAAAATTTCACCGGATCTCTCGTTGAGACAGC 857
Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120
||| |||||||||||||||||| |||| ||| ||||| |||||||||||||||||||
Sbjct 858 GCCCAAGTCGTTACGCCATTCGTGCGGGTCAGAATTTACCTGACAAGGAATTTCGCTACC 917
Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTT- 179
||||||||||||| |||||||||||||||||| ||||||||| | | ||||||| ||
Sbjct 918 TTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCGGTTCACAGCTTCGGATTG 977
Query 180 -AGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCAC 238
|||||| | | |||||||||| ||||||||||||||||| || ||||| || |
Sbjct 978 CTCCTAACCGCTCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCCCGTATACTTCGCC 1037
Query 239 TTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGA 298
|| || || ||| || |||||||||| ||||||||||| ||||| | || ||
Sbjct 1038 TTACGGCTTCGCACAGACCTGTGTTTTTGCTAAACAGTCGCTTGGGCCTTTTCACTGCGG 1097
Query 299 CCGGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCA--CCTTCTCCCGAAGT 356
|| | | ||| ||||| || ||||| ||| ||||||||||||||
Sbjct 1098 CCCCCTCGTGCT-------------ATTCACACT-ACCGGGGCACCCCTTCTCCCGAAGT 1143
Query 357 TACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCT 416
||||| | | ||||||| |||||||| | ||||||| | ||||||| | |||||||
Sbjct 1144 TACGGGGTCATTTTGCCGAGTTCCTTAACGAGAGTTCTTCCGCGCGCCTTAGAATTCTCT 1203
>seq43
Length=34756
Score = 98.7 bits (108), Expect = 3e-18
Identities = 190/279 (68%), Gaps = 10/279 (4%)
Strand=Plus/Minus
Query 10 ACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATC 69
|||| |||| ||||| ||| ||||||||||||| | | |||||||| |||
Sbjct 29260 ACTGTATCTGCACAGTTATTCCAATTTCACTGAGACAATCATTGAGACAGCTGTTGTATC 29201
Query 70 GTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCG 129
|||| ||||| |||| | | | | ||| | | || || ||| |||||||||||||||
Sbjct 29200 GTTAAATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGACCC 29141
Query 130 TTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGC--------GTTAG 181
| || | || ||||||| || | |||| ||| |||| | || | | ||
Sbjct 29140 TCATCGGTAAGGCCGCCATTGATTGGGGTTTCCTTCAAAACCTAGCCTACTAAAATTCAG 29081
Query 182 CTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT- 240
|||| ||| |||||| || || ||||||| |||||| | |||| | | ||
Sbjct 29080 CTAAGAAAATCCGTTAACCAGCCAACATCGGGCAGAAATCACACTCAATACTTTGATTTA 29021
Query 241 TCGTGTT-TGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
| | || |||| |||||| |||||| | ||||||||||
Sbjct 29020 TAATCTTATGCAAAGTGCTTTGTTTTAATTAAACAGTCG 28982
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260791703936
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |