Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07- 28] 658 sequences; 37,414,534 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq286 257 4e-66 >seq286 Length=4758 Score = 257 bits (284), Expect = 4e-66 Identities = 286/376 (76%), Gaps = 27/376 (7%) Strand=Plus/Plus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||| ||||||| |||||| | ||| |||||||||||| || |||||||||||||| Sbjct 4299 CTTTACGATCCGAAAACCTTCAT-CACTCACGCGGCATTG-CTCCGTCAGGCTTTCGCCC 4356 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 |||| || |||||| ||||||||||||||||||||||||| |||||||||||| |||| Sbjct 4357 ATTGCGGAAGATTCCCTACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAG 4416 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| | ||||| |||||||| | | |||| ||||||||||||||||||| ||||| || Sbjct 4417 TGTGGCCGATCACCCTCTCAGGTCGGCTACGCATCGTCGCCTTGGTGAGCCGTTACCCCA 4476 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAG-GCCCGA-AGGTCC----- 233 ||||||||||||| || | |||| |||| | |||| | | || | ||| Sbjct 4477 CCAACTAGCTAATGCGCCGCAGGCCCATC------CCCAAGTGACAGATTGCTCCGTCTT 4530 Query 234 -CCTGCTTTCTCCCGTAG-------GACGTATGCGGTATTAGCGTCCGTTTCCGAACGTT 285 || | ||||| | | || | ||| |||||||||| ||||||||| ||| Sbjct 4531 TCCAGTTTTCTTCAGGAGAAGAAAACAACTATTCGGTATTAGCTACCGTTTCCGGTAGTT 4590 Query 286 ATCCCCCACTACCAGGCAGATT-CCTAGGCATTACTCACCCGTCCGCCGCTCTCAA---G 341 |||| || ||||| || |||| | |||||||||||||||||||| | | | Sbjct 4591 GTCCCAAGCTTGAGGGCAGGTTGCCTACGTGTTACTCACCCGTCCGCCGCTAACTATCGG 4650 Query 342 AGAAGCAAGCTTCTCT 357 |||||||||||||||| Sbjct 4651 AGAAGCAAGCTTCTCT 4666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071992946240