Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07- 28] 658 sequences; 37,414,534 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq286 318 2e-84 >seq286 Length=4758 Score = 318 bits (352), Expect = 2e-84 Identities = 406/553 (73%), Gaps = 22/553 (4%) Strand=Plus/Plus Query 53 GGCATTCGGAGTTTGGTTGATTTCGGTAAGC-TTGTGGGCCCCCTAGACCATCCAGTGCT 111 ||||||||||||||| ||| | ||||| | ||| ||||||| | | ||| |||||| Sbjct 1910 GGCATTCGGAGTTTGACTGAGCTTGGTAACCCTTGCGGGCCCCGCACCCAATC-AGTGCT 1968 Query 112 CTACCTCCGGGAAGAAACACG----CGACGCTGCACCTAAATGCATTTCGGGGAGAACCA 167 |||||||| | || | ||| ||| |||||| |||||||||||||||| Sbjct 1969 CTACCTCC---ACGACTCTGTTTTCCGAGGCTAGCCCTAAAGCTATTTCGGGGAGAACCA 2025 Query 168 GCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCA 227 |||||| | |||| |||||| |||| || ||| || || |||||||| || |||||| Sbjct 2026 GCTATCTCCGAGTTCGATTGGAATTTCTCCGCTACCCCCACCTCATCCCCGCATTTTTCA 2085 Query 228 ACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAG 287 || | |||||||||| |||||| || ||||| ||||| |||| || || ||| Sbjct 2086 ACATGCGTGGGTTCGGGCCTCCAGTGCGTGTTACCGCACCTTCACCCTGGACAGGGGTAG 2145 Query 288 ATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGC 347 ||||| | ||||||||| || ||| | |||||||||| ||||||||||||| Sbjct 2146 ATCACCCGGTTTCGGGTCTACGTCCACGTACTAAGTCGCCCTATTCAGACTCGCTTTCGC 2205 Query 348 TACGGCTACCCCAC-ACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTT 406 | ||||| | | | | ||||||| || |||| ||||||| || ||||||| Sbjct 2206 TGCGGCTCCGGCTCTTCACCTTAACCTTGCACGGGAACG-TAACTCGCCGGTTCATTCTA 2264 Query 407 CAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCA 466 ||||||||||||| ||||| ||||||| | |||| ||| ||||| ||| Sbjct 2265 CAAAAGGCACGCCATCACC-----CCTAAAACG------GGCTCTGACTTTTTGTAAGCA 2313 Query 467 CATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGT 526 || |||||||||| |||||||||||||| | ||||| |||||||||||||||||||||| Sbjct 2314 CACGGTTTCAGGTTCTATTTCACTCCCCTTCCGGGGTGCTTTTCACCTTTCCCTCACGGT 2373 Query 527 ACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTC 586 ||| | | ||||||||| | | | ||||||||| ||| | | |||||| ||| ||||| Sbjct 2374 ACTGCTTCACTATCGGTCGCTAGGAAGTATTTAGCCTTGGCAGATGGTCCTGCCGGATTC 2433 Query 587 ACACGAAATTTCA 599 | ||| ||||| Sbjct 2434 ATACGGGGTTTCA 2446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817588040192