Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07-
28] 658 sequences; 37,414,534 total letters
Query= AAMG01001213.1
Length=600
Score E
Sequences producing significant alignments: (Bits) Value
seq286 318 2e-84
>seq286
Length=4758
Score = 318 bits (352), Expect = 2e-84
Identities = 406/553 (73%), Gaps = 22/553 (4%)
Strand=Plus/Plus
Query 53 GGCATTCGGAGTTTGGTTGATTTCGGTAAGC-TTGTGGGCCCCCTAGACCATCCAGTGCT 111
||||||||||||||| ||| | ||||| | ||| ||||||| | | ||| ||||||
Sbjct 1910 GGCATTCGGAGTTTGACTGAGCTTGGTAACCCTTGCGGGCCCCGCACCCAATC-AGTGCT 1968
Query 112 CTACCTCCGGGAAGAAACACG----CGACGCTGCACCTAAATGCATTTCGGGGAGAACCA 167
|||||||| | || | ||| ||| |||||| ||||||||||||||||
Sbjct 1969 CTACCTCC---ACGACTCTGTTTTCCGAGGCTAGCCCTAAAGCTATTTCGGGGAGAACCA 2025
Query 168 GCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCA 227
|||||| | |||| |||||| |||| || ||| || || |||||||| || ||||||
Sbjct 2026 GCTATCTCCGAGTTCGATTGGAATTTCTCCGCTACCCCCACCTCATCCCCGCATTTTTCA 2085
Query 228 ACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAG 287
|| | |||||||||| |||||| || ||||| ||||| |||| || || |||
Sbjct 2086 ACATGCGTGGGTTCGGGCCTCCAGTGCGTGTTACCGCACCTTCACCCTGGACAGGGGTAG 2145
Query 288 ATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGC 347
||||| | ||||||||| || ||| | |||||||||| |||||||||||||
Sbjct 2146 ATCACCCGGTTTCGGGTCTACGTCCACGTACTAAGTCGCCCTATTCAGACTCGCTTTCGC 2205
Query 348 TACGGCTACCCCAC-ACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTT 406
| ||||| | | | | ||||||| || |||| ||||||| || |||||||
Sbjct 2206 TGCGGCTCCGGCTCTTCACCTTAACCTTGCACGGGAACG-TAACTCGCCGGTTCATTCTA 2264
Query 407 CAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCA 466
||||||||||||| ||||| ||||||| | |||| ||| ||||| |||
Sbjct 2265 CAAAAGGCACGCCATCACC-----CCTAAAACG------GGCTCTGACTTTTTGTAAGCA 2313
Query 467 CATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGT 526
|| |||||||||| |||||||||||||| | ||||| ||||||||||||||||||||||
Sbjct 2314 CACGGTTTCAGGTTCTATTTCACTCCCCTTCCGGGGTGCTTTTCACCTTTCCCTCACGGT 2373
Query 527 ACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTC 586
||| | | ||||||||| | | | ||||||||| ||| | | |||||| ||| |||||
Sbjct 2374 ACTGCTTCACTATCGGTCGCTAGGAAGTATTTAGCCTTGGCAGATGGTCCTGCCGGATTC 2433
Query 587 ACACGAAATTTCA 599
| ||| |||||
Sbjct 2434 ATACGGGGTTTCA 2446
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1817588040192
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |