Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07- 28] 658 sequences; 37,414,534 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq286 255 1e-65 >seq286 Length=4758 Score = 255 bits (282), Expect = 1e-65 Identities = 301/394 (76%), Gaps = 10/394 (3%) Strand=Plus/Plus Query 29 TTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCC 88 ||||||||| || ||||||| |||||||| || |||||| ||||| || |||| Sbjct 2079 TTTTTCAACATGCGTGGGTTCGGGCCTCCAGTGCGT-GTTACCGCACCTT-CACCCTGGA 2136 Query 89 CATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCGACTA-GACGCCCTAGTAAG 147 || || |||||| |||||||| |||||||| ||| | |||| | ||||||| | || Sbjct 2137 CAGGGG-TAGATCACCCGGTTT-CGGGTCTACGTCCACGT-ACTAAGTCGCCCTATTCAG 2193 Query 148 ACTCGCTTTTCGCTACGCCTCCC-CTATTCGGTTAAGCTTTGCCACTGAAAATAAGTCGC 206 ||||||||| |||| || |||| || ||| | | | |||| ||| ||| |||| Sbjct 2194 ACTCGCTTT-CGCTGCGGCTCCGGCTCTTCACCTTAACCTTGCACGGGAACGTAACTCGC 2252 Query 207 TGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTACG 266 | |||| ||||||||| |||| |||||| ||| |||||| ||| ||||| | Sbjct 2253 CGGTTCATTCTACAAAAGGCACGCCATCACCCCTAAAAC-GGGCTCTGACTTTTTGTAAG 2311 Query 267 CATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCAC 326 || ||||||||||| |||||||||||||||| |||||||| |||||| |||||||||||| Sbjct 2312 CACACGGTTTCAGGTTCTATTTCACTCCCCT-TCCGGGGTGCTTTTCACCTTTCCCTCAC 2370 Query 327 GGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATA 386 |||||| ||||||||||||| | | ||||||||||||||| |||||||| || | Sbjct 2371 GGTACTGCTTCACTATCGGTCGCTAGGAAGTATTTAGCCTTGGCAGATGGTCCTGCCGGA 2430 Query 387 TTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 |||| || ||||| ||||| ||| ||||||| Sbjct 2431 TTCATACGGGGTTTCACGTGCCCCGCACTACTCG 2464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241591830272