Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07- 28] 658 sequences; 37,414,534 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq286 196 1e-47 >seq286 Length=4758 Score = 196 bits (216), Expect = 1e-47 Identities = 240/325 (74%), Gaps = 22/325 (7%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||| | || || ||| ||||||||||||||||| Sbjct 4331 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAGATTCCCTACTGCTGCCTCCCGTAG 4390 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||||| ||| |||||||| ||||||| || Sbjct 4391 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCCGATCACCCTCTCAGGTCGGCTACGCAT 4450 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||||| ||||||| || ||| | ||||||||| ||||| ||||| ||||||| | Sbjct 4451 CGTCGCCTTGGTGAGCCGTTACCCCACCAACTAGCTAATGCGCCGCAGGCCCATCCCCAA 4510 Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCCA----TCCTCTG---------AC-ATTATG 226 | || | | ||| || | | ||| || || | || | ||| Sbjct 4511 GTGACAGA---TTGCTC----CGTCTTTCCAGTTTTCTTCAGGAGAAGAAAACAACTATT 4563 Query 227 CGGTATTAGCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTT 286 |||||||||| ||||||| ||| | ||| || | |||||||||| ||||||| Sbjct 4564 CGGTATTAGCTACCGTTTCCGGTAGTTGTCCCAAGCTTGAGGGCAGGTTGCCTACGTGTT 4623 Query 287 ACTCACCCGTCCGCCACTAAGCTAT 311 ||||||||||||||| |||| |||| Sbjct 4624 ACTCACCCGTCCGCCGCTAA-CTAT 4647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998393430528