Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07- 28] 658 sequences; 37,414,534 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq30 682 0.0 >seq30 Length=41752 Score = 682 bits (756), Expect = 0.0 Identities = 968/1354 (71%), Gaps = 38/1354 (3%) Strand=Plus/Plus Query 1630 AATGTGTAAAAAATTTTAACTCATAAGGAGAGTATTG-TAATGTCAATTATTACTGATGT 1688 ||| | ||| |||||| || | | ||||||| ||| | ||| | |||||| |||| || Sbjct 35101 AATTTTTAATAAATTTAAATTTA-AAGGAGATTATCACTCATGACTATTATTTCTGACGT 35159 Query 1689 CTACGCACGTGAAGTCCTTGACTCACGCGGTAACCCAACACTTGAAGTAGAAGTTTACAC 1748 ||||| || |||||||| ||||| ||||||||||| ||| ||||||| ||||| ||| Sbjct 35160 GTACGCTCGCGAAGTCCTCGACTCCCGCGGTAACCCTACAGTTGAAGTTGAAGTATACCT 35219 Query 1749 TGAATCTGGTGCATTCGGTCGCGGTATGGTTCCTTCAGGAGCATCAACTGGTGAACACGA 1808 || || || ||| |||| |||| ||| || || || || ||||| ||||||| ||||| Sbjct 35220 GGAGTCCGGCGCAATCGGACGCGCTATCGTACCATCCGGTGCATCCACTGGTGCCCACGA 35279 Query 1809 AGCAGTAGAACTTCGTGATGGTGACAAAGCTCGTTACGGTGGTCTTGGTACTCAAAAAGC 1868 ||| || || ||||| ||||| |||||| | |||||| ||| ||| || |||| Sbjct 35280 AGCCGTTGAGCTTCGCGATGGCGACAAATCCCGTTACCTGGGTAAAGGTGTTCTGCAAGC 35339 Query 1869 AGTTGATAACGTAAACAACGTTATTGCTGAGCACATCATCGGATTCGACGTACGTGATCA 1928 ||| | ||||||||| | || ||| | | ||||| | || | | ||||| Sbjct 35340 TGTTAAAAACGTAAACGAAACAATCGCTCCAGAAGTAATCGGTATGGATGCATTGGATCA 35399 Query 1929 ACAAGGTATTGACCGCGCAATGATCGCTCTTGACGGTACTCCAAACAAAGGTAAACTTGG 1988 || ||||| ||| |||||| || | || ||||| ||||||||||||||||| || Sbjct 35400 ACTGGGTATCGACAAATTGATGATCACTTTGGATGGTACGCCAAACAAAGGTAAACTGGG 35459 Query 1989 TGCCAACGCTATTCTTGGTGTGTCTATCGCTGTAGCACGCGCAGCTGCTGACTACCTTGA 2048 ||| ||||| || || | ||| || || |||||||| || |||||||||||| || || Sbjct 35460 TGCTAACGCAATCCTGGCTGTATCCATGGCTGTAGCTCGTGCAGCTGCTGACGCTCTGGA 35519 Query 2049 AGTTCCACTTTACAGCTACCTTGGCGGATTCAACACTAAAGTTCTTCCAACTCCAATGAT 2108 | ||| | ||| ||||| |||||||||||| ||||||| |||||| |||||||| Sbjct 35520 CCTGCCATTGTACGTTTACCTGGGCGGATTCAACGCTAAAGTACTTCCAGTACCAATGAT 35579 Query 2109 GAACATCATCAACGGTGGTTCTCACTCAGACGCTCCAATCGCTTTCCAAGAATTTATGAT 2168 ||||||||||||||||||| || | ||| |||| | ||||| || ||| | Sbjct 35580 GAACATCATCAACGGTGGTGAGCATGCTGACAACAACATCGACGTTCAAGAGTTCATGGT 35639 Query 2169 TGTACCTGCTGGTGCACCAACATTCAAAGAAGCGCTTCGTTGGGGTGCTGAAATCTTCCA 2228 | | |||| ||| ||||||| ||||||||||| ||||| ||||| ||||||||||| Sbjct 35640 TCTTCCTGTTGGAGCACCAAGCTTCAAAGAAGCTCTTCGCGTAGGTGCAGAAATCTTCCA 35699 Query 2229 CGCGCTTAAGAAAATCCTTAAAGAAC----GTGGACTTGAAACAGCCGTAGGTGACGAAG 2284 | || |||||| || || | || || | ||||| ||||||||||||| Sbjct 35700 CAACCT----GAAATCCGTACTGAGCTCCAAAGGCCTGAACACAGCTGTAGGTGACGAAG 35755 Query 2285 GTGGTTTCGC-----ACCTCGTTTCGACGGAACTGAAGATGGTGTTGAAACTATCATCAA 2339 | || ||||| |||| | ||| |||| ||||| | | || |||||| | Sbjct 35756 GCGGCTTCGCACCGAACCTTGGTTC----GAAC-GAAGAAGCAATCACTACAATCATCGA 35810 Query 2340 AGCTATCGAAGCTGCTGGATATGTACCAGGTAAAGACGTATTTATCGGACTTGACTGTGC 2399 ||| || ||| || || || |||||| |||||||| | || | ||| || Sbjct 35811 AGCGATTGAAAAAGCAGGTTACAAACCAGGCGTTGACGTATTCCTGGGTATGGACGTAGC 35870 Query 2400 ATCATCTGAATTCTACGATGCAGAACGTAAAGTTTACGACTACACTAAATTTGAAGGTGA 2459 || |||| |||||| | ||| ||||| ||||| | ||| || || Sbjct 35871 TTCCACTGAGTTCTACAA---AGATGGTAAA---------TACAC---ACTTGCTGGCGA 35915 Query 2460 AGGCGCTGCTGTTCGTACTGCTGCAGAACAAATCGACTACCTTGAAGAATTGGTTAACAA 2519 ||| || | | ||| | || || | | ||| || | || |||| | || Sbjct 35916 AGGTAAATCT-TAC--ACTTCCGCTGAGTATGTTGACCTTCTGGCTTCATGGGTTGAGAA 35972 Query 2520 ATACCCAATCATCACTATCGAAGATGGTATGGACGAAAACGACTGGGACGGTTGGAAATC 2579 |||||| ||||||||||| ||||| |||||| |||| |||||||||| |||||||||| Sbjct 35973 ATACCCTATCATCACTATTGAAGACGGTATGTCCGAAGACGACTGGGATGGTTGGAAATT 36032 Query 2580 TCTTACTGAACGTCTTGGTGGTAAAGTTCAATTGGTTGGTGACGACTTCTTCGTAACTAA 2639 || || ||| | || | ||||| ||| | |||||||| ||||| |||||||| || Sbjct 36033 GCTCACAGAAAAATTGGGAGACAAAGTACAACTCGTTGGTGATGACTTGTTCGTAACGAA 36092 Query 2640 CACTGCTTACCTTGAAAAAGGTATTGCAGAACACGCTGCTAACTCAATCCTTATCAAAGT 2699 ||| | || | | |||||| | |||| | |||||| ||||| |||||||| Sbjct 36093 CACAGAGCGTCTGGGTAGAGGTATCGAAGAAGGTATCGGTAACTCCATCCTGATCAAAGT 36152 Query 2700 TAACCAAATCGGTACTTTGACTGAAACTTTTGACGCTATCGAAATGGCGAAAGAAGCTGG 2759 ||||||||||||||| ||||||||||| ||||| || ||||||||||| ||| || || Sbjct 36153 TAACCAAATCGGTACATTGACTGAAACATTTGATGCAATCGAAATGGCTAAACGCGCAGG 36212 Query 2760 ATACACAGCAGTAGTATCACACCGTTCAGGTGAAACTGAAGATTCAACAATCGCTGATAT 2819 |||||| || ||| | || |||||||| ||||| | ||||| ||||||||||| || Sbjct 36213 ATACACTGCTGTAATCTCTCACCGTTCCGGTGAGTCCGAAGACAGCACAATCGCTGACAT 36272 Query 2820 TGCAGTTGCAACTAACGCTGGTCAAATTAAGACAGGTTCATTGTCACGTACTGACCGTAT 2879 || |||||||| ||||| |||||||| || || ||| | || ||||| |||||||| Sbjct 36273 CGCTGTTGCAACAAACGCGGGTCAAATCAAAACGGGTGCTCCTTCCCGTACAGACCGTAT 36332 Query 2880 TGCTAAATACAACCAATTGCTTCGTATCGAAGACCAACTTGGTGAAGTTGCAGAATACCG 2939 || || |||||||||||||| || ||||| || ||||| |||||| | || ||||| Sbjct 36333 CGCGAAGTACAACCAATTGCTCCGCATCGAGGATCAACTGGGTGAACTGGCTCAATACAA 36392 Query 2940 TGGTTTGAAATCATTCTACAACTTGAAAAAATAA 2973 |||| | ||| ||||||||| | ||||||||| Sbjct 36393 TGGTCTTAAAGGTTTCTACAACCTCAAAAAATAA 36426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156037180754952