Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07-
28] 658 sequences; 37,414,534 total letters
Query= NC_023503.1
Length=48800
Score E
Sequences producing significant alignments: (Bits) Value
seq30 682 0.0
>seq30
Length=41752
Score = 682 bits (756), Expect = 0.0
Identities = 968/1354 (71%), Gaps = 38/1354 (3%)
Strand=Plus/Plus
Query 1630 AATGTGTAAAAAATTTTAACTCATAAGGAGAGTATTG-TAATGTCAATTATTACTGATGT 1688
||| | ||| |||||| || | | ||||||| ||| | ||| | |||||| |||| ||
Sbjct 35101 AATTTTTAATAAATTTAAATTTA-AAGGAGATTATCACTCATGACTATTATTTCTGACGT 35159
Query 1689 CTACGCACGTGAAGTCCTTGACTCACGCGGTAACCCAACACTTGAAGTAGAAGTTTACAC 1748
||||| || |||||||| ||||| ||||||||||| ||| ||||||| ||||| |||
Sbjct 35160 GTACGCTCGCGAAGTCCTCGACTCCCGCGGTAACCCTACAGTTGAAGTTGAAGTATACCT 35219
Query 1749 TGAATCTGGTGCATTCGGTCGCGGTATGGTTCCTTCAGGAGCATCAACTGGTGAACACGA 1808
|| || || ||| |||| |||| ||| || || || || ||||| ||||||| |||||
Sbjct 35220 GGAGTCCGGCGCAATCGGACGCGCTATCGTACCATCCGGTGCATCCACTGGTGCCCACGA 35279
Query 1809 AGCAGTAGAACTTCGTGATGGTGACAAAGCTCGTTACGGTGGTCTTGGTACTCAAAAAGC 1868
||| || || ||||| ||||| |||||| | |||||| ||| ||| || ||||
Sbjct 35280 AGCCGTTGAGCTTCGCGATGGCGACAAATCCCGTTACCTGGGTAAAGGTGTTCTGCAAGC 35339
Query 1869 AGTTGATAACGTAAACAACGTTATTGCTGAGCACATCATCGGATTCGACGTACGTGATCA 1928
||| | ||||||||| | || ||| | | ||||| | || | | |||||
Sbjct 35340 TGTTAAAAACGTAAACGAAACAATCGCTCCAGAAGTAATCGGTATGGATGCATTGGATCA 35399
Query 1929 ACAAGGTATTGACCGCGCAATGATCGCTCTTGACGGTACTCCAAACAAAGGTAAACTTGG 1988
|| ||||| ||| |||||| || | || ||||| ||||||||||||||||| ||
Sbjct 35400 ACTGGGTATCGACAAATTGATGATCACTTTGGATGGTACGCCAAACAAAGGTAAACTGGG 35459
Query 1989 TGCCAACGCTATTCTTGGTGTGTCTATCGCTGTAGCACGCGCAGCTGCTGACTACCTTGA 2048
||| ||||| || || | ||| || || |||||||| || |||||||||||| || ||
Sbjct 35460 TGCTAACGCAATCCTGGCTGTATCCATGGCTGTAGCTCGTGCAGCTGCTGACGCTCTGGA 35519
Query 2049 AGTTCCACTTTACAGCTACCTTGGCGGATTCAACACTAAAGTTCTTCCAACTCCAATGAT 2108
| ||| | ||| ||||| |||||||||||| ||||||| |||||| ||||||||
Sbjct 35520 CCTGCCATTGTACGTTTACCTGGGCGGATTCAACGCTAAAGTACTTCCAGTACCAATGAT 35579
Query 2109 GAACATCATCAACGGTGGTTCTCACTCAGACGCTCCAATCGCTTTCCAAGAATTTATGAT 2168
||||||||||||||||||| || | ||| |||| | ||||| || ||| |
Sbjct 35580 GAACATCATCAACGGTGGTGAGCATGCTGACAACAACATCGACGTTCAAGAGTTCATGGT 35639
Query 2169 TGTACCTGCTGGTGCACCAACATTCAAAGAAGCGCTTCGTTGGGGTGCTGAAATCTTCCA 2228
| | |||| ||| ||||||| ||||||||||| ||||| ||||| |||||||||||
Sbjct 35640 TCTTCCTGTTGGAGCACCAAGCTTCAAAGAAGCTCTTCGCGTAGGTGCAGAAATCTTCCA 35699
Query 2229 CGCGCTTAAGAAAATCCTTAAAGAAC----GTGGACTTGAAACAGCCGTAGGTGACGAAG 2284
| || |||||| || || | || || | ||||| |||||||||||||
Sbjct 35700 CAACCT----GAAATCCGTACTGAGCTCCAAAGGCCTGAACACAGCTGTAGGTGACGAAG 35755
Query 2285 GTGGTTTCGC-----ACCTCGTTTCGACGGAACTGAAGATGGTGTTGAAACTATCATCAA 2339
| || ||||| |||| | ||| |||| ||||| | | || |||||| |
Sbjct 35756 GCGGCTTCGCACCGAACCTTGGTTC----GAAC-GAAGAAGCAATCACTACAATCATCGA 35810
Query 2340 AGCTATCGAAGCTGCTGGATATGTACCAGGTAAAGACGTATTTATCGGACTTGACTGTGC 2399
||| || ||| || || || |||||| |||||||| | || | ||| ||
Sbjct 35811 AGCGATTGAAAAAGCAGGTTACAAACCAGGCGTTGACGTATTCCTGGGTATGGACGTAGC 35870
Query 2400 ATCATCTGAATTCTACGATGCAGAACGTAAAGTTTACGACTACACTAAATTTGAAGGTGA 2459
|| |||| |||||| | ||| ||||| ||||| | ||| || ||
Sbjct 35871 TTCCACTGAGTTCTACAA---AGATGGTAAA---------TACAC---ACTTGCTGGCGA 35915
Query 2460 AGGCGCTGCTGTTCGTACTGCTGCAGAACAAATCGACTACCTTGAAGAATTGGTTAACAA 2519
||| || | | ||| | || || | | ||| || | || |||| | ||
Sbjct 35916 AGGTAAATCT-TAC--ACTTCCGCTGAGTATGTTGACCTTCTGGCTTCATGGGTTGAGAA 35972
Query 2520 ATACCCAATCATCACTATCGAAGATGGTATGGACGAAAACGACTGGGACGGTTGGAAATC 2579
|||||| ||||||||||| ||||| |||||| |||| |||||||||| ||||||||||
Sbjct 35973 ATACCCTATCATCACTATTGAAGACGGTATGTCCGAAGACGACTGGGATGGTTGGAAATT 36032
Query 2580 TCTTACTGAACGTCTTGGTGGTAAAGTTCAATTGGTTGGTGACGACTTCTTCGTAACTAA 2639
|| || ||| | || | ||||| ||| | |||||||| ||||| |||||||| ||
Sbjct 36033 GCTCACAGAAAAATTGGGAGACAAAGTACAACTCGTTGGTGATGACTTGTTCGTAACGAA 36092
Query 2640 CACTGCTTACCTTGAAAAAGGTATTGCAGAACACGCTGCTAACTCAATCCTTATCAAAGT 2699
||| | || | | |||||| | |||| | |||||| ||||| ||||||||
Sbjct 36093 CACAGAGCGTCTGGGTAGAGGTATCGAAGAAGGTATCGGTAACTCCATCCTGATCAAAGT 36152
Query 2700 TAACCAAATCGGTACTTTGACTGAAACTTTTGACGCTATCGAAATGGCGAAAGAAGCTGG 2759
||||||||||||||| ||||||||||| ||||| || ||||||||||| ||| || ||
Sbjct 36153 TAACCAAATCGGTACATTGACTGAAACATTTGATGCAATCGAAATGGCTAAACGCGCAGG 36212
Query 2760 ATACACAGCAGTAGTATCACACCGTTCAGGTGAAACTGAAGATTCAACAATCGCTGATAT 2819
|||||| || ||| | || |||||||| ||||| | ||||| ||||||||||| ||
Sbjct 36213 ATACACTGCTGTAATCTCTCACCGTTCCGGTGAGTCCGAAGACAGCACAATCGCTGACAT 36272
Query 2820 TGCAGTTGCAACTAACGCTGGTCAAATTAAGACAGGTTCATTGTCACGTACTGACCGTAT 2879
|| |||||||| ||||| |||||||| || || ||| | || ||||| ||||||||
Sbjct 36273 CGCTGTTGCAACAAACGCGGGTCAAATCAAAACGGGTGCTCCTTCCCGTACAGACCGTAT 36332
Query 2880 TGCTAAATACAACCAATTGCTTCGTATCGAAGACCAACTTGGTGAAGTTGCAGAATACCG 2939
|| || |||||||||||||| || ||||| || ||||| |||||| | || |||||
Sbjct 36333 CGCGAAGTACAACCAATTGCTCCGCATCGAGGATCAACTGGGTGAACTGGCTCAATACAA 36392
Query 2940 TGGTTTGAAATCATTCTACAACTTGAAAAAATAA 2973
|||| | ||| ||||||||| | |||||||||
Sbjct 36393 TGGTCTTAAAGGTTTCTACAACCTCAAAAAATAA 36426
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 156037180754952
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |