Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236775.1_202017-07- 28] 456 sequences; 30,119,330 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq60 235 1e-59 >seq60 Length=1011 Score = 235 bits (260), Expect = 1e-59 Identities = 264/347 (76%), Gaps = 16/347 (5%) Strand=Plus/Minus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||| | |||||| ||||| | ||| |||||||| ||| || |||| ||| || || Sbjct 613 CTTTACGACCCGAAGGCCTTCCT-CACTCACGCGGCGTTG-CTCCGTCAGACTTGCGTCC 556 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 |||| || |||||| ||||||||||||||||||||||||| |||||||||||| |||| Sbjct 555 ATTGCGGAAGATTCCCTACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAG 496 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| | ||||| |||||||| | | |||| ||||||||||||||||||| ||||| || Sbjct 495 TGTGGCCGATCACCCTCTCAGGTCGGCTACGCATCGTCGCCTTGGTGAGCCGTTACCCCA 436 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAG---GC-CCGAAGGTCCCCT 236 ||||||||||||| || | |||| |||| || | || || ||| |||| Sbjct 435 CCAACTAGCTAATGCGCCGCAGGCCCATCCCCAAGTGACAGATTGCTCCGTCTTTCCC-- 378 Query 237 GCTTTCTCCCGTAGGA-------CGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCC 289 | | |||| | |||| | ||| ||||||||| |||||||||| | ||||||| Sbjct 377 GATCCCTCCAGGAGGAGAGACCGCATATCTGGTATTAGCATCCGTTTCCGGAGGTTATCC 318 Query 290 CCCACTACCAGGCAGATT-CCTAGGCATTACTCACCCGTCCGCCGCT 335 | || ||||| || |||| | |||||||||||||||||||| Sbjct 317 CAGTCTTGAGGGCAGGTTGCCTACGTGTTACTCACCCGTCCGCCGCT 271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071995111680