Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236775.1_202017-07- 28] 456 sequences; 30,119,330 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq145 170 7e-40 seq292 161 4e-37 >seq145 Length=499 Score = 170 bits (188), Expect = 7e-40 Identities = 223/305 (73%), Gaps = 4/305 (1%) Strand=Plus/Plus Query 53 GGCATTCGGAGTTTGGTTGATTTCGGTAAGC-TTGTGGGCCCCCTAGACCATCCAGTGCT 111 ||||||||||||||| || | ||||| | ||| || |||| ||| ||||||| Sbjct 168 GGCATTCGGAGTTTGACTGGACTTGGTAACCCTTGGCGGGCCCCGCACCCAATCAGTGCT 227 Query 112 CTACCTCCGGGAAGA--AACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGC 169 |||||||| | | | ||||| ||| ||| |||||| |||||||||||||||||| Sbjct 228 CTACCTCCAGCATGCTCAACAC-CGAGGCTAGCCCTAAAGCTATTTCGGGGAGAACCAGC 286 Query 170 TATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAAC 229 ||| | |||| |||||| |||| || ||| || || |||||||| | |||||||| Sbjct 287 TATTTCCGAGTTCGATTGGAATTTCTCCGCTACCCCCACCTCATCCCCGAATTTTTCAAC 346 Query 230 CTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGAT 289 | |||||||||| |||||| || ||||| ||||| |||| || || ||||| Sbjct 347 ATTCGTGGGTTCGGGCCTCCAGTGCGTGTTACCGCACCTTCACCCTGGACAGGGGTAGAT 406 Query 290 CACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTA 349 ||| | ||||||||| ||| ||| |||||||||| |||||||||||||| Sbjct 407 CACACGGTTTCGGGTCTACATCCACGTACTATGGCGCCCTATTCAGACTCGCTTTCGCTG 466 Query 350 CGGCT 354 ||||| Sbjct 467 CGGCT 471 >seq292 Length=268 Score = 161 bits (178), Expect = 4e-37 Identities = 164/213 (77%), Gaps = 13/213 (6%) Strand=Plus/Plus Query 388 AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAA-AGGCACTTCA 446 ||||||| || ||||||| ||||||||||||| ||||| | || | ||| Sbjct 3 AACTCGCCGGTTCATTCTACAAAAGGCACGCCATCACC-----CATATAGAGG------- 50 Query 447 GCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACT 506 |||| ||| ||||| || || |||||||||| |||||||||||| | || | ||| || Sbjct 51 GCTCTGACTTTTTGTAAGCGCACGGTTTCAGGTTCTATTTCACTCCGCTCCCGCGGTGCT 110 Query 507 TTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAA 566 ||||||||||||||||||||||| | | ||||||||| ||| |||||||||| ||| Sbjct 111 TTTCACCTTTCCCTCACGGTACTGCTTCACTATCGGTCGCCAGAGAGTATTTAGCCTTGG 170 Query 567 CGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599 | | |||||| ||| ||||| ||||| ||||| Sbjct 171 CAGATGGTCCTGCCGGATTCCCACGAGGTTTCA 203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817591711744