Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236775.1_202017-07-
28] 456 sequences; 30,119,330 total letters
Query= AAMG01001291.1
Length=420
Score E
Sequences producing significant alignments: (Bits) Value
seq292 168 2e-39
seq145 82.4 2e-13
>seq292
Length=268
Score = 168 bits (186), Expect = 2e-39
Identities = 166/209 (79%), Gaps = 4/209 (2%)
Strand=Plus/Plus
Query 199 TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTG 258
||| |||| | |||| ||||||||| |||| ||||||| | || |||||| |||
Sbjct 2 TAACTCGCCGGTTCATTCTACAAAAGGCACGCCATCACCCAT-ATAGAGGGCTCTGACTT 60
Query 259 CTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTT 318
||||| || ||||||||||| ||||||||||||| ||| ||| ||| |||||| ||||
Sbjct 61 TTTGTAAGCGCACGGTTTCAGGTTCTATTTCACTCCGCTC-CCGCGGTGCTTTTCACCTT 119
Query 319 TCCCTCACGGTACTAGTTCACTATCGGTCAGTCAG-TAGTATTTAGCCTTGGAGGATGGT 377
|||||||||||||| ||||||||||||| | ||| ||||||||||||||| ||||||
Sbjct 120 TCCCTCACGGTACTGCTTCACTATCGGTC-GCCAGAGAGTATTTAGCCTTGGCAGATGGT 178
Query 378 CCCCCCATATTCAGACAAAGTTTCTCGTG 406
|| || |||| || | ||||| ||||
Sbjct 179 CCTGCCGGATTCCCACGAGGTTTCACGTG 207
>seq145
Length=499
Score = 82.4 bits (90), Expect = 2e-13
Identities = 109/142 (77%), Gaps = 7/142 (5%)
Strand=Plus/Plus
Query 29 TTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCC 88
||||||||| | || ||||||| |||||||| || |||||| ||||| || ||||
Sbjct 338 TTTTTCAACATTCGTGGGTTCGGGCCTCCAGTGCGT-GTTACCGCACCTT-CACCCTGGA 395
Query 89 CATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCGACTA-GACGCCCTAGTAAG 147
|| || |||||| | |||||| |||||||| ||| | |||| | ||||||| | ||
Sbjct 396 CAGGGG-TAGATCACACGGTTT-CGGGTCTACATCCACGT-ACTATGGCGCCCTATTCAG 452
Query 148 ACTCGCTTTTCGCTACGCCTCC 169
|||||| ||||||| || ||||
Sbjct 453 ACTCGC-TTTCGCTGCGGCTCC 473
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1241594338304
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |