Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq6179 385 1e-104 seq1654 80.6 7e-13 >seq6179 Length=8968 Score = 385 bits (426), Expect = 1e-104 Identities = 332/409 (81%), Gaps = 3/409 (1%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||||||| | |||| |||||||||||||||||||||||||||||||||||||||| || Sbjct 5995 TACCTGAGAAGAAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 5936 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 ||||||| |||||||| ||||||||||||| ||||||||||| | |||| | ||||| Sbjct 5935 AAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCAGGCGGTCATTTAAGTCTGGTGT 5876 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 |||||| ||||| |||| ||| | ||| | | |||| |||| ||||| ||| Sbjct 5875 TTAATCCCGGGGCTCAACCCCGGA-TCGCACTGGAAACTGGGTGACTTGAGTGCAGAAGA 5817 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| Sbjct 5816 GGAGAGTGGAATTCCACGTGTAGCGGTGAAATGCGTAGATATGTGGAGGAACACCAGTGG 5757 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 ||||||| | | ||||| | ||||||||| | || |||||||||||||||||||||| Sbjct 5756 CGAAGGCGACTCTCTGGGCTGTAACTGACGCTGAGGCGCGAAAGCGTGGGGAGCAAACAG 5697 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTT--A 360 |||||||||||||||||||||||||| |||||||| |||| |||| ||| ||| | Sbjct 5696 GATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAGTGCTAGGTGTTAGGGGTTTCGA 5637 Query 361 CTTCCTTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 ||||||| || || |||| | | ||| ||||||||||| ||| Sbjct 5636 TACCCTTGGTGCCGAAGTTAACACATTAAGCACTCCGCCTGGGGAGTAC 5588 >seq1654 Length=34765 Score = 80.6 bits (88), Expect = 7e-13 Identities = 74/91 (81%), Gaps = 2/91 (2%) Strand=Plus/Minus Query 238 AATGGCGAAGGCAGCCCCCTGGG-ATAACACTGACGCTCATGCACGAAAGCGTGGGGAGC 296 ||||||||||||| ||| || | |||| ||||||| | | | ||||| || |||| ||| Sbjct 8050 AATGGCGAAGGCAACCCTCTATGTATAA-ACTGACGTTAAGGGACGAAGGCTTGGGTAGC 7992 Query 297 AAACAGGATTAGATACCCTGGTAGTCCACGC 327 || ||||||||||||||| |||||||| || Sbjct 7991 GAATAGGATTAGATACCCTAGTAGTCCAGGC 7961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289500816864