Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07-
28] 7,691 sequences; 41,753,485 total letters
Query= AAMG01000538.1
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
seq6179 217 2e-54
>seq6179
Length=8968
Score = 217 bits (240), Expect = 2e-54
Identities = 198/248 (80%), Gaps = 9/248 (4%)
Strand=Plus/Plus
Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60
|||| ||||||| ||||||||||||||||| |||||||| ||| ||||| | ||||||||
Sbjct 2742 CTTAACCTTCCAGCACCGGGCAGGCGTCAGCCCGTATACTTCGCCTTACGG-CTTCGCAC 2800
Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120
||||||||||||| ||||||||||||| || ||| ||||| || || | |||
Sbjct 2801 AGACCTGTGTTTTTGCTAAACAGTCGCTTGGGCCTTTTCACTGCGGCCCCCTCGTGCTAT 2860
Query 121 ACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180
||| || | | | ||||||||||||||||||||||||||| |||||||||||
Sbjct 2861 TCAC-------ACTACCGG-GGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAG 2912
Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240
||||||||| | ||||| ||| |||||||| ||||||| | | | ||||||||||||
Sbjct 2913 TTCCTTAACGAGAGTTCTTCCGCGCGCCTTAGAATTCTCTTCTCGCCTACCTGTGTCGGT 2972
Query 241 TTACGGTA 248
|| |||||
Sbjct 2973 TTGCGGTA 2980
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694348262643
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |