Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq6179 217 2e-54 >seq6179 Length=8968 Score = 217 bits (240), Expect = 2e-54 Identities = 198/248 (80%), Gaps = 9/248 (4%) Strand=Plus/Plus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| ||||||||||||||||| |||||||| ||| ||||| | |||||||| Sbjct 2742 CTTAACCTTCCAGCACCGGGCAGGCGTCAGCCCGTATACTTCGCCTTACGG-CTTCGCAC 2800 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 ||||||||||||| ||||||||||||| || ||| ||||| || || | ||| Sbjct 2801 AGACCTGTGTTTTTGCTAAACAGTCGCTTGGGCCTTTTCACTGCGGCCCCCTCGTGCTAT 2860 Query 121 ACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180 ||| || | | | ||||||||||||||||||||||||||| ||||||||||| Sbjct 2861 TCAC-------ACTACCGG-GGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAG 2912 Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240 ||||||||| | ||||| ||| |||||||| ||||||| | | | |||||||||||| Sbjct 2913 TTCCTTAACGAGAGTTCTTCCGCGCGCCTTAGAATTCTCTTCTCGCCTACCTGTGTCGGT 2972 Query 241 TTACGGTA 248 || ||||| Sbjct 2973 TTGCGGTA 2980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694348262643