Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq6179 300 4e-79 seq1654 98.7 3e-18 >seq6179 Length=8968 Score = 300 bits (332), Expect = 4e-79 Identities = 319/420 (76%), Gaps = 18/420 (4%) Strand=Plus/Plus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| || |||||||||||||| ||| |||||||| | |||| || |||||||| Sbjct 2547 CGCGGGTAACCTGCATCTTCACAGGTATTAAAATTTCACCGGATCTCTCGTTGAGACAGC 2606 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 ||| |||||||||||||||||| |||| ||| ||||| ||||||||||||||||||| Sbjct 2607 GCCCAAGTCGTTACGCCATTCGTGCGGGTCAGAATTTACCTGACAAGGAATTTCGCTACC 2666 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTT- 179 ||||||||||||| |||||||||||||||||| ||||||||| | | ||||||| || Sbjct 2667 TTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCGGTTCACAGCTTCGGATTG 2726 Query 180 -AGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCAC 238 |||||| | | |||||||||| ||||||||||||||||| || ||||| || | Sbjct 2727 CTCCTAACCGCTCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCCCGTATACTTCGCC 2786 Query 239 TTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGA 298 || || || ||| || |||||||||| ||||||||||| ||||| | || || Sbjct 2787 TTACGGCTTCGCACAGACCTGTGTTTTTGCTAAACAGTCGCTTGGGCCTTTTCACTGCGG 2846 Query 299 CCGGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCA--CCTTCTCCCGAAGT 356 || | | ||| ||||| || ||||| ||| |||||||||||||| Sbjct 2847 CCCCCTCGTGCT-------------ATTCACACT-ACCGGGGCACCCCTTCTCCCGAAGT 2892 Query 357 TACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCT 416 ||||| | | ||||||| |||||||| | ||||||| | ||||||| | ||||||| Sbjct 2893 TACGGGGTCATTTTGCCGAGTTCCTTAACGAGAGTTCTTCCGCGCGCCTTAGAATTCTCT 2952 >seq1654 Length=34765 Score = 98.7 bits (108), Expect = 3e-18 Identities = 190/279 (68%), Gaps = 10/279 (4%) Strand=Plus/Minus Query 10 ACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATC 69 |||| |||| ||||| ||| ||||||||||||| | | |||||||| ||| Sbjct 23773 ACTGTATCTGCACAGTTATTCCAATTTCACTGAGACAATCATTGAGACAGCTGTTGTATC 23714 Query 70 GTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCG 129 |||| ||||| |||| | | | | ||| | | || || ||| ||||||||||||||| Sbjct 23713 GTTAAATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGACCC 23654 Query 130 TTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGC--------GTTAG 181 | || | || ||||||| || | |||| ||| |||| | || | | || Sbjct 23653 TCATCGGTAAGGCCGCCATTGATTGGGGTTTCCTTCAAAACCTAGCCTACTAAAATTCAG 23594 Query 182 CTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT- 240 |||| ||| |||||| || || ||||||| |||||| | |||| | | || Sbjct 23593 CTAAGAAAATCCGTTAACCAGCCAACATCGGGCAGAAATCACACTCAATACTTTGATTTA 23534 Query 241 TCGTGTT-TGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 | | || |||| |||||| |||||| | |||||||||| Sbjct 23533 TAATCTTATGCAAAGTGCTTTGTTTTAATTAAACAGTCG 23495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260703031872