Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq6179 605 8e-171 >seq6179 Length=8968 Score = 605 bits (670), Expect = 8e-171 Identities = 437/499 (88%), Gaps = 7/499 (1%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||||||||||||||| |||||| || Sbjct 5590 TACGGTCGCAAGACTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCAGTGGAGTAT 5531 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCC-TCTGACCCCT 119 |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| | Sbjct 5530 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAGGTCTTGACATCCCTCTGACCGGT 5471 Query 120 CTAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGT-GACAGGTGATGCATGGTTGTCGTC 178 |||||| | ||||| |||||| |||||| |||||||| ||||||||||||||| Sbjct 5470 ACAGAGATGTACCTTTCC--TTCGGG--ACAGAGGAGACAGGTGGTGCATGGTTGTCGTC 5415 Query 179 AGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTT 238 |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 5414 AGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGATCTTAGTT 5355 Query 239 GCCATCA-TTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGG 297 |||| || || | ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 5354 GCCAGCACTTCGGGTGGGCACTCTAAGGTGACTGCCGGTGACAAACCGGAGGAAGGTGGG 5295 Query 298 GACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAA 357 || ||||||||||||||||||||||||||| |||||||||||||| ||||||||| | Sbjct 5294 GATGACGTCAAATCATCATGCCCCTTATGACCTGGGCTACACACGTACTACAATGGCCGG 5235 Query 358 TACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGA 417 ||||| |||||| ||||||||||||| | | ||||| | |||| | |||||||||||| Sbjct 5234 TACAACGGGCAGTGAAACCGCGAGGTGGAACGAATCCTAAAAAGCCGGTCTCAGTTCGGA 5175 Query 418 TTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGC 477 ||| || |||||||||| || |||||| ||||| ||||||||||| ||||||||||| Sbjct 5174 TTGCAGGCTGCAACTCGCCTGCATGAAGTCGGAATTGCTAGTAATCGCGGATCAGCATGC 5115 Query 478 TACGGTGAATACGTTCCCG 496 ||||||||||||||||| Sbjct 5114 CGCGGTGAATACGTTCCCG 5096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503884327360