Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07-
28] 7,691 sequences; 41,753,485 total letters
Query= AAMG01000811.1
Length=502
Score E
Sequences producing significant alignments: (Bits) Value
seq6179 605 8e-171
>seq6179
Length=8968
Score = 605 bits (670), Expect = 8e-171
Identities = 437/499 (88%), Gaps = 7/499 (1%)
Strand=Plus/Minus
Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60
|||| |||||| |||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 5590 TACGGTCGCAAGACTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCAGTGGAGTAT 5531
Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCC-TCTGACCCCT 119
|||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |
Sbjct 5530 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAGGTCTTGACATCCCTCTGACCGGT 5471
Query 120 CTAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGT-GACAGGTGATGCATGGTTGTCGTC 178
|||||| | ||||| |||||| |||||| |||||||| |||||||||||||||
Sbjct 5470 ACAGAGATGTACCTTTCC--TTCGGG--ACAGAGGAGACAGGTGGTGCATGGTTGTCGTC 5415
Query 179 AGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTT 238
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 5414 AGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGATCTTAGTT 5355
Query 239 GCCATCA-TTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGG 297
|||| || || | ||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 5354 GCCAGCACTTCGGGTGGGCACTCTAAGGTGACTGCCGGTGACAAACCGGAGGAAGGTGGG 5295
Query 298 GACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAA 357
|| ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |
Sbjct 5294 GATGACGTCAAATCATCATGCCCCTTATGACCTGGGCTACACACGTACTACAATGGCCGG 5235
Query 358 TACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGA 417
||||| |||||| ||||||||||||| | | ||||| | |||| | ||||||||||||
Sbjct 5234 TACAACGGGCAGTGAAACCGCGAGGTGGAACGAATCCTAAAAAGCCGGTCTCAGTTCGGA 5175
Query 418 TTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGC 477
||| || |||||||||| || |||||| ||||| ||||||||||| |||||||||||
Sbjct 5174 TTGCAGGCTGCAACTCGCCTGCATGAAGTCGGAATTGCTAGTAATCGCGGATCAGCATGC 5115
Query 478 TACGGTGAATACGTTCCCG 496
|||||||||||||||||
Sbjct 5114 CGCGGTGAATACGTTCCCG 5096
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1503884327360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |