Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq6179 257 4e-66 >seq6179 Length=8968 Score = 257 bits (284), Expect = 4e-66 Identities = 286/376 (76%), Gaps = 27/376 (7%) Strand=Plus/Plus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||| ||||||| |||||| | ||| |||||||||||| || |||||||||||||| Sbjct 6048 CTTTACGATCCGAAAACCTTCAT-CACTCACGCGGCATTG-CTCCGTCAGGCTTTCGCCC 6105 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 |||| || |||||| ||||||||||||||||||||||||| |||||||||||| |||| Sbjct 6106 ATTGCGGAAGATTCCCTACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAG 6165 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| | ||||| |||||||| | | |||| ||||||||||||||||||| ||||| || Sbjct 6166 TGTGGCCGATCACCCTCTCAGGTCGGCTACGCATCGTCGCCTTGGTGAGCCGTTACCCCA 6225 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAG-GCCCGA-AGGTCC----- 233 ||||||||||||| || | |||| |||| | |||| | | || | ||| Sbjct 6226 CCAACTAGCTAATGCGCCGCAGGCCCATC------CCCAAGTGACAGATTGCTCCGTCTT 6279 Query 234 -CCTGCTTTCTCCCGTAG-------GACGTATGCGGTATTAGCGTCCGTTTCCGAACGTT 285 || | ||||| | | || | ||| |||||||||| ||||||||| ||| Sbjct 6280 TCCAGTTTTCTTCAGGAGAAGAAAACAACTATTCGGTATTAGCTACCGTTTCCGGTAGTT 6339 Query 286 ATCCCCCACTACCAGGCAGATT-CCTAGGCATTACTCACCCGTCCGCCGCTCTCAA---G 341 |||| || ||||| || |||| | |||||||||||||||||||| | | | Sbjct 6340 GTCCCAAGCTTGAGGGCAGGTTGCCTACGTGTTACTCACCCGTCCGCCGCTAACTATCGG 6399 Query 342 AGAAGCAAGCTTCTCT 357 |||||||||||||||| Sbjct 6400 AGAAGCAAGCTTCTCT 6415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071917552480