Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq6179 255 1e-65 >seq6179 Length=8968 Score = 255 bits (282), Expect = 1e-65 Identities = 301/394 (76%), Gaps = 10/394 (3%) Strand=Plus/Plus Query 29 TTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCC 88 ||||||||| || ||||||| |||||||| || |||||| ||||| || |||| Sbjct 3828 TTTTTCAACATGCGTGGGTTCGGGCCTCCAGTGCGT-GTTACCGCACCTT-CACCCTGGA 3885 Query 89 CATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCGACTA-GACGCCCTAGTAAG 147 || || |||||| |||||||| |||||||| ||| | |||| | ||||||| | || Sbjct 3886 CAGGGG-TAGATCACCCGGTTT-CGGGTCTACGTCCACGT-ACTATGTCGCCCTATTCAG 3942 Query 148 ACTCGCTTTTCGCTACGCCTCCC-CTATTCGGTTAAGCTTTGCCACTGAAAATAAGTCGC 206 ||||||||| |||| || |||| || ||| | | | |||| ||| ||| |||| Sbjct 3943 ACTCGCTTT-CGCTGCGGCTCCGGCTCTTCACCTTAACCTTGCACGGGAACGTAACTCGC 4001 Query 207 TGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTACG 266 | |||| ||||||||| |||| |||||| ||| |||||| ||| ||||| | Sbjct 4002 CGGTTCATTCTACAAAAGGCACGCCATCACCCCTAAAAC-GGGCTCTGACTTTTTGTAAG 4060 Query 267 CATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCAC 326 || ||||||||||| |||||||||||||||| |||||||| |||||| |||||||||||| Sbjct 4061 CACACGGTTTCAGGTTCTATTTCACTCCCCT-TCCGGGGTGCTTTTCACCTTTCCCTCAC 4119 Query 327 GGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATA 386 |||||| ||||||||||||| | | ||||||||||||||| |||||||| || | Sbjct 4120 GGTACTGCTTCACTATCGGTCGCTAGGAAGTATTTAGCCTTGGCAGATGGTCCTGCCGGA 4179 Query 387 TTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 |||| || ||||| ||||| ||| ||||||| Sbjct 4180 TTCATACGGGGTTTCACGTGCCCCGCACTACTCG 4213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241504508544