Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq6179 381 9e-104 >seq6179 Length=8968 Score = 381 bits (422), Expect = 9e-104 Identities = 249/274 (91%), Gaps = 0/274 (0%) Strand=Plus/Plus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| ||||||| |||||||||| |||||| |||||||||||| || ||||| ||||| Sbjct 1821 GAGGGGGGCTTCACGCTTAGATGCTTTCAGCGCTTATCCCTTCCGTACATAGCTACCCAG 1880 Query 62 CTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTAC 121 | ||| | |||| | ||||||||| |||||| ||| |||||||||||||||||||||| Sbjct 1881 CGGTGCTCCTGGCGGAACAACTGGTACACCAGCGGTACGTCCATCCCGGTCCTCTCGTAC 1940 Query 122 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGC 181 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct 1941 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACAGATAGGGACCGAACTGTCTCAC 2000 Query 182 GACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 241 ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct 2001 GACGTTCTGAACCCAGCTCGCGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 2060 Query 242 TACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 |||||||||||||||||| || |||||||||||| Sbjct 2061 TACTTCAGCCCCAGGATGCGATGAGCCGACATCG 2094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780741825276