Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07-
28] 7,691 sequences; 41,753,485 total letters
Query= AAMG01001962.1
Length=275
Score E
Sequences producing significant alignments: (Bits) Value
seq6179 381 9e-104
>seq6179
Length=8968
Score = 381 bits (422), Expect = 9e-104
Identities = 249/274 (91%), Gaps = 0/274 (0%)
Strand=Plus/Plus
Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61
|||| ||||||| |||||||||| |||||| |||||||||||| || ||||| |||||
Sbjct 1821 GAGGGGGGCTTCACGCTTAGATGCTTTCAGCGCTTATCCCTTCCGTACATAGCTACCCAG 1880
Query 62 CTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTAC 121
| ||| | |||| | ||||||||| |||||| ||| ||||||||||||||||||||||
Sbjct 1881 CGGTGCTCCTGGCGGAACAACTGGTACACCAGCGGTACGTCCATCCCGGTCCTCTCGTAC 1940
Query 122 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGC 181
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct 1941 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACAGATAGGGACCGAACTGTCTCAC 2000
Query 182 GACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 241
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct 2001 GACGTTCTGAACCCAGCTCGCGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 2060
Query 242 TACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275
|||||||||||||||||| || ||||||||||||
Sbjct 2061 TACTTCAGCCCCAGGATGCGATGAGCCGACATCG 2094
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 780741825276
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |