Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq6179 257 4e-66 >seq6179 Length=8968 Score = 257 bits (284), Expect = 4e-66 Identities = 314/424 (74%), Gaps = 16/424 (4%) Strand=Plus/Plus Query 4 CTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63 |||||| | ||||| ||||| ||| |||||||||| ||| | |||||||| ||||||| Sbjct 6048 CTTTACGATCCGAAAACCTTCATCACTCACGCGGCATTGCTCCGTCAGGCTTTCGCCCAT 6107 Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123 || | || |||||| ||||||||||||||||||||||||| |||||||||||| |||||| Sbjct 6108 TGCGGAAGATTCCCTACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTG 6167 Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCC 183 |||| | ||| |||||||| | |||| | |||||||||| |||| ||| ||||||| || Sbjct 6168 TGGCCGATCACCCTCTCAGGTCGGCTACGCATCGTCGCCTTGGTGAGCCGTTACCCCACC 6227 Query 184 AACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAG---GCCCGAAGGTCCCCCTCT 240 ||||||||||| | || ||||| ||||| || || | | || | | Sbjct 6228 AACTAGCTAATGCGCCGCAGGCCCATCCCCAAGTGACAGATTGCTCCGTCTTTCCAGT-T 6286 Query 241 TTGGTCTTGCGACG-------TTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCC 293 || || | || | ||| |||||||||| ||||||||| || ||| |||| Sbjct 6287 TTCTTCAGGAGAAGAAAACAACTATTCGGTATTAGCTACCGTTTCCGGTAGTTGTCCCAA 6346 Query 294 TCCATCAGGCA-GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCA 352 | |||| ||| || | ||||||||||||||||| || | || || |||| Sbjct 6347 GCTTGAGGGCAGGTTGCCTACGTGTTACTCACCCGTCCGCCGCTAACTATCGGAGAAGCA 6406 Query 353 AGCT--GCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATC 410 |||| |||| || ||| ||||||||||||| |||||| |||||||||||||| | Sbjct 6407 AGCTTCTCTTCAAGT--CCGCTCGACTTGCATGTATTAGGCATGCCGCCAGCGTTCGTCC 6464 Query 411 TGAG 414 |||| Sbjct 6465 TGAG 6468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222305985216