Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq6179 412 8e-113 >seq6179 Length=8968 Score = 412 bits (456), Expect = 8e-113 Identities = 339/409 (83%), Gaps = 3/409 (1%) Strand=Plus/Minus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5995 TACCTGAGAAGAAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 5936 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGT 120 |||||| |||||||||| ||||||||||| | ||| ||| ||| ||||||| | || Sbjct 5935 AAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCAGGCGGTCATTTAAGTCTGGTGT 5876 Query 121 GAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGG 180 || | ||||||||||||| | || | ||||||| | || |||||||| || Sbjct 5875 TTAATCCCGGGGCTCAACCCCGGATC-GCACTGGAAACTGGGTGACTTGAGTGCAGAAGA 5817 Query 181 GGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGG 240 || ||||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct 5816 GGAGAGTGGAATTCCACGTGTAGCGGTGAAATGCGTAGATATGTGGAGGAACACCAGTGG 5757 Query 241 CGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAG 300 |||||||| || |||| ||||||||||| ||||||| |||||||||||||||||||||| Sbjct 5756 CGAAGGCGACTCTCTGGGCTGTAACTGACGCTGAGGCGCGAAAGCGTGGGGAGCAAACAG 5697 Query 301 GATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAA 360 ||||||||||||||||||||||||||||||||||||| | |||||||| ||| | | Sbjct 5696 GATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAGTGCTAGGTGTTAGGG-GTTTCG 5638 Query 361 GTGCTC-CGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | | | ||||||| || ||| || |||| | ||| ||||||||||| Sbjct 5637 ATACCCTTGGTGCCGAAGTTAACACATTAAGCACTCCGCCTGGGGAGTA 5589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203107461888