Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq6179 288 3e-75 >seq6179 Length=8968 Score = 288 bits (318), Expect = 3e-75 Identities = 362/485 (75%), Gaps = 13/485 (3%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGACA--GTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59 |||||| ||| ||||||||| || ||| |||||||||||||| ||||||||||| Sbjct 3947 CGAGTCTGAATAGGGCGACATAGTACGTGGACGTAGACCCGAAACCGGGTGATCTACCCC 3888 Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAA 119 || ||||| ||||||||||||||||||| ||||||| |||||||||| ||||||||||| Sbjct 3887 TGTCCAGGGTGAAGGTGCGGTAACACGCACTGGAGGCCCGAACCCACGCATGTTGAAAAA 3828 Query 120 TTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 179 | ||||||||| || |||||| || |||| | || | |||| ||| |||||||||||| Sbjct 3827 TGCGGGGATGAGGTGGGGGTAGCGGAGAAATTCCAATCGAACTCGGAGATAGCTGGTTCT 3768 Query 180 CTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCACCATC--GGGGGTAGAGCACTGTTA 237 | |||||| |||||| ||||| | || || || |||||||||||| | Sbjct 3767 CCCCGAAATAGCTTTAGGGCTAGCCTCGGAAAACAGAGTCGTGGAGGTAGAGCACTGAT- 3709 Query 238 TGGCTAGGGGGTCATTGCGACTTACCAAAC-CATTGCAAACTCCGAATGCGCATCAGTTT 296 ||| | |||| | | ||||||| | || | |||||||||||||| ||| || | Sbjct 3708 TGGGTGCGGGGCCCGCAAGGGTTACCAAGCTCAGT-CAAACTCCGAATGC-CAT-AGACT 3652 Query 297 TAC-CGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGA 355 ||| ||||||| || || |||||||| ||| | | | ||| || | || || Sbjct 3651 TACTTCCGGGAGTCAGACAGTGAGTGCTAAGATCCATTGTCAAAAGGGAAACAGCCCAGA 3592 Query 356 CTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGA 415 | ||||||||||| ||| || || | ||||| | || || || |||| ||| Sbjct 3591 CCATCAGCTAAGGTCCCCAAGTGTGTGTTAAGTGGGA--AAGGATGTGGAGTTGCACAGA 3534 Query 416 CAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAG 475 || | ||||||||||||| |||||||||| |||| ||||||||||||| |||||||| | Sbjct 3533 CAACCAGGATGTTGGCTTAGAAGCAGCCA-CCATTGAAAGAGTGCGTAATAGCTCACTGG 3475 Query 476 TCGAG 480 ||||| Sbjct 3474 TCGAG 3470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689470052864