Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07-
28] 7,691 sequences; 41,753,485 total letters
Query= AAMG01002193.1
Length=560
Score E
Sequences producing significant alignments: (Bits) Value
seq6179 288 3e-75
>seq6179
Length=8968
Score = 288 bits (318), Expect = 3e-75
Identities = 362/485 (75%), Gaps = 13/485 (3%)
Strand=Plus/Minus
Query 2 CGAGTCCGAACAGGGCGACA--GTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59
|||||| ||| ||||||||| || ||| |||||||||||||| |||||||||||
Sbjct 3947 CGAGTCTGAATAGGGCGACATAGTACGTGGACGTAGACCCGAAACCGGGTGATCTACCCC 3888
Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAA 119
|| ||||| ||||||||||||||||||| ||||||| |||||||||| |||||||||||
Sbjct 3887 TGTCCAGGGTGAAGGTGCGGTAACACGCACTGGAGGCCCGAACCCACGCATGTTGAAAAA 3828
Query 120 TTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 179
| ||||||||| || |||||| || |||| | || | |||| ||| ||||||||||||
Sbjct 3827 TGCGGGGATGAGGTGGGGGTAGCGGAGAAATTCCAATCGAACTCGGAGATAGCTGGTTCT 3768
Query 180 CTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCACCATC--GGGGGTAGAGCACTGTTA 237
| |||||| |||||| ||||| | || || || |||||||||||| |
Sbjct 3767 CCCCGAAATAGCTTTAGGGCTAGCCTCGGAAAACAGAGTCGTGGAGGTAGAGCACTGAT- 3709
Query 238 TGGCTAGGGGGTCATTGCGACTTACCAAAC-CATTGCAAACTCCGAATGCGCATCAGTTT 296
||| | |||| | | ||||||| | || | |||||||||||||| ||| || |
Sbjct 3708 TGGGTGCGGGGCCCGCAAGGGTTACCAAGCTCAGT-CAAACTCCGAATGC-CAT-AGACT 3652
Query 297 TAC-CGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGA 355
||| ||||||| || || |||||||| ||| | | | ||| || | || ||
Sbjct 3651 TACTTCCGGGAGTCAGACAGTGAGTGCTAAGATCCATTGTCAAAAGGGAAACAGCCCAGA 3592
Query 356 CTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGA 415
| ||||||||||| ||| || || | ||||| | || || || |||| |||
Sbjct 3591 CCATCAGCTAAGGTCCCCAAGTGTGTGTTAAGTGGGA--AAGGATGTGGAGTTGCACAGA 3534
Query 416 CAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAG 475
|| | ||||||||||||| |||||||||| |||| ||||||||||||| |||||||| |
Sbjct 3533 CAACCAGGATGTTGGCTTAGAAGCAGCCA-CCATTGAAAGAGTGCGTAATAGCTCACTGG 3475
Query 476 TCGAG 480
|||||
Sbjct 3474 TCGAG 3470
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1689470052864
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |