Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq6179 113 8e-23 >seq6179 Length=8968 Score = 113 bits (124), Expect = 8e-23 Identities = 178/251 (71%), Gaps = 17/251 (7%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||||| || |||||||| |||| | || ||||||||||||| | ||| | Sbjct 4616 AGAGCACACGGAGGATGCCTAGGCGCTAGGAGCCGATGAAGGACGTGGCGAACAACGAAA 4557 Query 61 A-GCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGG 119 || ||||||| | || || |||||||||| | | ||||||||||||||||| | Sbjct 4556 CTGCCTCGGGGAGCT-GTAAGCAAGCTTTGATCCGGGGGTGTCCGAATGGGGAAACCCAG 4498 Query 120 CCCTTTGGGTCATTGCATG----------CTGAATACATAGGT-ATGCAAAGCGA-ACGC 167 | | |||| ||| | | |||||||||||||| ||||| || | || Sbjct 4497 C---TGGGGTAATTTCCAGTTACTCATAACTGAATACATAGGTTATGCAGAGGCATACCA 4441 Query 168 GGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAG 227 | ||||||||||||||||||| || ||||| ||||| ||| | |||||| ||||| Sbjct 4440 AGGGAACTGAAACATCTAAGTACCTTGAGGAAGAGAAAACAATAGTGATTCCGTCAGTAG 4381 Query 228 TGGCGAGCGAA 238 |||||||||| Sbjct 4380 CGGCGAGCGAA 4370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918329365856