Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq233 358 2e-94 >seq233 Length=1412 Score = 358 bits (396), Expect = 2e-94 Identities = 359/466 (77%), Gaps = 0/466 (0%) Strand=Plus/Minus Query 2508 ATTGGTTAACAAATACCCAATCATCACTATCGAAGATGGTATGGACGAAAACGACTGGGA 2567 || |||| | |||||||| ||||||||||| ||||| |||||| |||| |||||||||| Sbjct 1350 ATGGGTTGAGAAATACCCTATCATCACTATTGAAGACGGTATGTCCGAAGACGACTGGGA 1291 Query 2568 CGGTTGGAAATCTCTTACTGAACGTCTTGGTGGTAAAGTTCAATTGGTTGGTGACGACTT 2627 |||||||||| || || ||| | || | ||||| ||| | |||||||| ||||| Sbjct 1290 TGGTTGGAAATTGCTCACAGAAAAATTGGGAGACAAAGTACAACTCGTTGGTGATGACTT 1231 Query 2628 CTTCGTAACTAACACTGCTTACCTTGAAAAAGGTATTGCAGAACACGCTGCTAACTCAAT 2687 |||||||| ||||| | || | | |||||| | |||| | |||||| || Sbjct 1230 GTTCGTAACGAACACAGAGCGTCTGGGTAGAGGTATCGAAGAAGGTATCGGTAACTCCAT 1171 Query 2688 CCTTATCAAAGTTAACCAAATCGGTACTTTGACTGAAACTTTTGACGCTATCGAAATGGC 2747 ||| ||||||||||||||||||||||| ||||||||||| ||||| || ||||||||||| Sbjct 1170 CCTGATCAAAGTTAACCAAATCGGTACATTGACTGAAACATTTGATGCAATCGAAATGGC 1111 Query 2748 GAAAGAAGCTGGATACACAGCAGTAGTATCACACCGTTCAGGTGAAACTGAAGATTCAAC 2807 ||| || |||||||| || ||| | || |||||||| ||||| | ||||| || Sbjct 1110 TAAACGCGCAGGATACACTGCTGTAATCTCTCACCGTTCCGGTGAGTCCGAAGACAGCAC 1051 Query 2808 AATCGCTGATATTGCAGTTGCAACTAACGCTGGTCAAATTAAGACAGGTTCATTGTCACG 2867 ||||||||| || || |||||||| ||||| |||||||| || || ||| | || || Sbjct 1050 AATCGCTGACATCGCTGTTGCAACAAACGCGGGTCAAATCAAAACGGGTGCTCCTTCCCG 991 Query 2868 TACTGACCGTATTGCTAAATACAACCAATTGCTTCGTATCGAAGACCAACTTGGTGAAGT 2927 ||| |||||||| || || |||||||||||||| || ||||| || ||||| |||||| | Sbjct 990 TACAGACCGTATCGCGAAGTACAACCAATTGCTCCGCATCGAGGATCAACTGGGTGAACT 931 Query 2928 TGCAGAATACCGTGGTTTGAAATCATTCTACAACTTGAAAAAATAA 2973 || ||||| |||| | ||| ||||||||| | ||||||||| Sbjct 930 GGCTCAATACAATGGTCTTAAAGGTTTCTACAACCTCAAAAAATAA 885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156024148915404