Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07-
28] 7,691 sequences; 41,753,485 total letters
Query= NC_023503.1
Length=48800
Score E
Sequences producing significant alignments: (Bits) Value
seq233 358 2e-94
>seq233
Length=1412
Score = 358 bits (396), Expect = 2e-94
Identities = 359/466 (77%), Gaps = 0/466 (0%)
Strand=Plus/Minus
Query 2508 ATTGGTTAACAAATACCCAATCATCACTATCGAAGATGGTATGGACGAAAACGACTGGGA 2567
|| |||| | |||||||| ||||||||||| ||||| |||||| |||| ||||||||||
Sbjct 1350 ATGGGTTGAGAAATACCCTATCATCACTATTGAAGACGGTATGTCCGAAGACGACTGGGA 1291
Query 2568 CGGTTGGAAATCTCTTACTGAACGTCTTGGTGGTAAAGTTCAATTGGTTGGTGACGACTT 2627
|||||||||| || || ||| | || | ||||| ||| | |||||||| |||||
Sbjct 1290 TGGTTGGAAATTGCTCACAGAAAAATTGGGAGACAAAGTACAACTCGTTGGTGATGACTT 1231
Query 2628 CTTCGTAACTAACACTGCTTACCTTGAAAAAGGTATTGCAGAACACGCTGCTAACTCAAT 2687
|||||||| ||||| | || | | |||||| | |||| | |||||| ||
Sbjct 1230 GTTCGTAACGAACACAGAGCGTCTGGGTAGAGGTATCGAAGAAGGTATCGGTAACTCCAT 1171
Query 2688 CCTTATCAAAGTTAACCAAATCGGTACTTTGACTGAAACTTTTGACGCTATCGAAATGGC 2747
||| ||||||||||||||||||||||| ||||||||||| ||||| || |||||||||||
Sbjct 1170 CCTGATCAAAGTTAACCAAATCGGTACATTGACTGAAACATTTGATGCAATCGAAATGGC 1111
Query 2748 GAAAGAAGCTGGATACACAGCAGTAGTATCACACCGTTCAGGTGAAACTGAAGATTCAAC 2807
||| || |||||||| || ||| | || |||||||| ||||| | ||||| ||
Sbjct 1110 TAAACGCGCAGGATACACTGCTGTAATCTCTCACCGTTCCGGTGAGTCCGAAGACAGCAC 1051
Query 2808 AATCGCTGATATTGCAGTTGCAACTAACGCTGGTCAAATTAAGACAGGTTCATTGTCACG 2867
||||||||| || || |||||||| ||||| |||||||| || || ||| | || ||
Sbjct 1050 AATCGCTGACATCGCTGTTGCAACAAACGCGGGTCAAATCAAAACGGGTGCTCCTTCCCG 991
Query 2868 TACTGACCGTATTGCTAAATACAACCAATTGCTTCGTATCGAAGACCAACTTGGTGAAGT 2927
||| |||||||| || || |||||||||||||| || ||||| || ||||| |||||| |
Sbjct 990 TACAGACCGTATCGCGAAGTACAACCAATTGCTCCGCATCGAGGATCAACTGGGTGAACT 931
Query 2928 TGCAGAATACCGTGGTTTGAAATCATTCTACAACTTGAAAAAATAA 2973
|| ||||| |||| | ||| ||||||||| | |||||||||
Sbjct 930 GGCTCAATACAATGGTCTTAAAGGTTTCTACAACCTCAAAAAATAA 885
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 156024148915404
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |