Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12]
75 sequences; 31,888,966 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq38 269 4e-70
seq8 150 3e-34
seq4 145 1e-32
>seq38
Length=6689
Score = 269 bits (298), Expect = 4e-70
Identities = 200/229 (87%), Gaps = 5/229 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| |
Sbjct 2660 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT-C 2603
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | ||||||
Sbjct 2602 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGTGGTTTAACAAGATT 2543
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||||| ||| ||||||||| || |||| || || |||||||||||||||||||
Sbjct 2542 ACCCGGGCCTTCCGGCCAAGGGAGTA--CTCGCTGGCCACGTCAGTGTAGCGCGCGTGCG 2485
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2484 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 2436
>seq8
Length=3860646
Score = 150 bits (166), Expect = 3e-34
Identities = 135/166 (81%), Gaps = 4/166 (2%)
Strand=Plus/Plus
Query 74 AACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTACCCGGACCTGTC 132
|| |||| ||||| |||||||||| |||| | ||| | |||||||||||| ||| |
Sbjct 304251 AATAATTTCAATGCTCTATCCCCAGTACGACGTGGTTTAATAAGATTACCCGGGCCTTCC 304310
Query 133 GGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCT 192
|||||||| || |||| || || ||||||||| ||||||| ||||||||||||||
Sbjct 304311 GGCCAAGGGAGTA--CTCGCTGGCCACGTCAGTGTAGTGCGCGTGAGGCCCAGAACATCT 304368
Query 193 AAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT-GGCCTAA 237
|||||||| ||| ||||||||||||||||||||||| | ||| |||
Sbjct 304369 AAGGGCATTACAAACCTGTTATTGCCTCAAACTTCCATCGGCTTAA 304414
Score = 140 bits (154), Expect = 5e-31
Identities = 126/155 (81%), Gaps = 5/155 (3%)
Strand=Plus/Plus
Query 74 AACAATTGCAATGATCTATCCCCATCACGATGAAATTT-CAAAGATTACCCGGACCTGTC 132
|| |||||||||| |||||||||| ||||| | | ||| | |||||||||||| ||| |
Sbjct 272978 AATAATTGCAATGCTCTATCCCCAGCACGACGTACTTTACCAAGATTACCCGGGCCTTCC 273037
Query 133 GGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCT 192
|| ||||| || |||| || || ||| |||||||||| ||||||||| |||||
Sbjct 273038 GGTCAAGGGAGTA--CTCGCTGGCCACGTCACTGTAGCGCGCCTGCGGCCCATAACAT-- 273093
Query 193 AAGGGCATCACAGACCTGTTATTGCCTCAAACTTC 227
|||||||| ||||||||||||||| ||||||||||
Sbjct 273094 AAGGGCATTACAGACCTGTTATTGTCTCAAACTTC 273128
>seq4
Length=1631742
Score = 145 bits (160), Expect = 1e-32
Identities = 129/159 (81%), Gaps = 3/159 (2%)
Strand=Plus/Minus
Query 71 ACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTACCCGGACCT 129
|| || ||||| |||| |||||||| | ||||| | || | |||||||||||| |||
Sbjct 416456 ACAAATAATTGTAATGCTCTATCCCTAGCACGACGTGGCTTAACAAGATTACCCGGGCCT 416397
Query 130 GTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACA 189
||||||| | || |||| || || | |||||||||||||||||||||||||||
Sbjct 416396 TCCGGCCAAAGAAGTA--CTCGCTGGCCACGTTAGTGTAGCGCGCGTGCGGCCCAGAACA 416339
Query 190 TCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
| ||||| |||||||||||||||||||||||||||||||
Sbjct 416338 TGTAAGGCCATCACAGACCTGTTATTGCCTCAAACTTCC 416300
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751999453625
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |