Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12] 75 sequences; 31,888,966 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq38 352 5e-95 seq4 131 3e-28 seq8 127 3e-27 >seq38 Length=6689 Score = 352 bits (390), Expect = 5e-95 Identities = 236/259 (91%), Gaps = 3/259 (1%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2518 TACTCGCTGGCCACGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 2459 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||||||||||||| |||| || ||| |||||||||||||||||||||| Sbjct 2458 ACCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCAGC 2400 Query 121 CACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 | || || | || |||||||||||||||||||||||||||||||||||| |||| Sbjct 2399 GTACTGCCGGAG-CAATACGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATT 2341 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 2340 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 2281 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| |||||||||| Sbjct 2280 AAAGAGCTCTCAATCTGTC 2262 >seq4 Length=1631742 Score = 131 bits (144), Expect = 3e-28 Identities = 83/90 (92%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||| ||| |||||||||||||||||||||||||||| ||||| |||||||| Sbjct 416382 TACTCGCTGGCCACGTTAGTGTAGCGCGCGTGCGGCCCAGAACATGTAAGGCCATCACAG 416323 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCT 90 ||||||||||||||||||||||||| |||| Sbjct 416322 ACCTGTTATTGCCTCAAACTTCCATCGGCT 416293 >seq8 Length=3860646 Score = 127 bits (140), Expect = 3e-27 Identities = 82/90 (91%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||| ||||||||||| ||||||| |||||||||||||||||||||| ||| Sbjct 304322 TACTCGCTGGCCACGTCAGTGTAGTGCGCGTGAGGCCCAGAACATCTAAGGGCATTACAA 304381 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCT 90 ||||||||||||||||||||||||| |||| Sbjct 304382 ACCTGTTATTGCCTCAAACTTCCATCGGCT 304411 Score = 105 bits (116), Expect = 1e-20 Identities = 78/90 (87%), Gaps = 2/90 (2%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||| ||||| |||||||||| ||||||||| ||||| |||||||| |||| Sbjct 273049 TACTCGCTGGCCACGTCACTGTAGCGCGCCTGCGGCCCATAACAT--AAGGGCATTACAG 273106 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCT 90 ||||||||||| |||||||||| || |||| Sbjct 273107 ACCTGTTATTGTCTCAAACTTCTATCGGCT 273136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796799421075