Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12] 75 sequences; 31,888,966 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq38 419 4e-115 seq8 203 6e-50 seq4 201 2e-49 >seq38 Length=6689 Score = 419 bits (464), Expect = 4e-115 Identities = 280/309 (91%), Gaps = 2/309 (1%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||| | ||| ||| | ||| |||||||||| Sbjct 2353 GAACGAGACCTTAACCTGCTAAATAGCCCGTATTGCTCCGGCAGTACGCTGGCTTCTTAG 2412 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2413 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 2472 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 |||||||||||||||||||||||||||||||| |||| ||||| | || ||||||||| Sbjct 2473 GATGTTCTGGGCCGCACGCGCGCTACACTGACGTGGCCAGCGAGTAC-TC-CCTTGGCCG 2530 Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259 ||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 2531 GAAGGCCCGGGTAATCTTGTTAAACCACGTCGTGCTGGGGATAGAGCATTGCAATTATTG 2590 Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319 |||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||| Sbjct 2591 CTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTG 2650 Query 320 CCCTTTGTA 328 ||||||||| Sbjct 2651 CCCTTTGTA 2659 >seq8 Length=3860646 Score = 203 bits (224), Expect = 6e-50 Identities = 145/164 (88%), Gaps = 2/164 (1%) Strand=Plus/Minus Query 95 AAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGC 154 ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| | Sbjct 304412 AAGCCGATGGAAGTTTGAGGCAATAACAGGTTTGTAATGCCCTTAGATGTTCTGGGCCTC 304353 Query 155 ACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAAT 214 |||||| |||||||||| |||| ||||| | || |||||||||||||| | ||||||| Sbjct 304352 ACGCGCACTACACTGACGTGGCCAGCGAGTAC-TC-CCTTGGCCGGAAGGCCCGGGTAAT 304295 Query 215 CTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 ||| |||||| ||||| ||||||||||||||||| ||||||| Sbjct 304294 CTTATTAAACCACGTCGTACTGGGGATAGAGCATTGAAATTATT 304251 Score = 185 bits (204), Expect = 2e-44 Identities = 141/163 (87%), Gaps = 4/163 (2%) Strand=Plus/Minus Query 96 AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCA 155 ||||||| |||||||||| ||||||||||||||| ||||||||| |||| ||||||||| Sbjct 273136 AGCCGATAGAAGTTTGAGACAATAACAGGTCTGTAATGCCCTTA--TGTTATGGGCCGCA 273079 Query 156 CGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATC 215 |||||||||| |||| |||| ||||| | || ||||| |||||||| | |||||||| Sbjct 273078 GGCGCGCTACAGTGACGTGGCCAGCGAGTAC-TC-CCTTGACCGGAAGGCCCGGGTAATC 273021 Query 216 TTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 ||| |||| | ||||||||||||||||||||||||||||||| Sbjct 273020 TTGGTAAAGTACGTCGTGCTGGGGATAGAGCATTGCAATTATT 272978 >seq4 Length=1631742 Score = 201 bits (222), Expect = 2e-49 Identities = 143/163 (88%), Gaps = 2/163 (1%) Strand=Plus/Plus Query 96 AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCA 155 |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct 416293 AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGGCCTTACATGTTCTGGGCCGCA 416352 Query 156 CGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATC 215 ||||||||||||| || |||| ||||| | | | |||||||||||| | |||||||| Sbjct 416353 CGCGCGCTACACTAACGTGGCCAGCGAGTACTT--CTTTGGCCGGAAGGCCCGGGTAATC 416410 Query 216 TTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 ||||||| | |||||||| ||||||||||||| |||||||| Sbjct 416411 TTGTTAAGCCACGTCGTGCTAGGGATAGAGCATTACAATTATT 416453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947199289600