Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12] 75 sequences; 31,888,966 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq3 104 1e-16 seq2 100 1e-15 seq5 95.1 5e-14 >seq3 Length=709076 Score = 104 bits (114), Expect = 1e-16 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 349079 AGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAG 349138 || || || || || | ||||| ||| || || |||||||| | || || ||||| || Sbjct 482382 AGGATTTCTTTCAGCCGGGGCACGCCGAGCGTGACGTTCTTCGACGACACACCGGCGAAA 482323 Query 349139 TGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATG 349198 |||||||| | ||| |||| |||||| ||||||||||||| |||| ||||||| | Sbjct 482322 TGGAAGGTGTTGAGCGTCATCTGCGTCGCGGGCTCGCCGATGGACTGCGCCGCGAGAACA 482263 Query 349199 CCTACCATCTCGCCGGG 349215 || |||||||| ||||| Sbjct 482262 CCAACCATCTCACCGGG 482246 >seq2 Length=5461500 Score = 100 bits (110), Expect = 1e-15 Identities = 121/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 448988 TCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCG 449047 ||||||| | || || ||||| ||||||||| | | |||||||||||||||||||| Sbjct 3928201 TCGAGCAGCTTGCCGACCGTCATTCGCGACGGGAAACCGTGCGGGTTCATGATGATGTCC 3928142 Query 449048 GGCGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACG 449107 ||||| ||| || ||| |||||||| || ||| || | || || ||| Sbjct 3928141 GGCGTGAGCCCGTTGTCGGCGAACGGCATGTCTTCCTGGTCCACGATGAGCCCCACCACG 3928082 Query 449108 CCCTTCTGGCCGTGGCGGCTGCAGAACTTGTCCCCCTGCTCGGGC 449152 |||||||||||||||||| |||||||||| || |||| ||| Sbjct 3928081 CCCTTCTGGCCGTGGCGGGACGAGAACTTGTCACCGAGCTCCGGC 3928037 Score = 89.7 bits (98), Expect = 2e-12 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 448640 GCGCCGTAGGACTTGAAGGAGACGCGCTCCATGTCGCCCAATCGGAGCCCGCCGTGTCGC 448699 |||||||| | ||| | || |||||||||| |||||||| ||||| ||||||| || Sbjct 3928552 GCGCCGTACGCGATGAGGCAGTCGCGCTCCATCTCGCCCAACCGGAGGCCGCCGTCCCGT 3928493 Query 448700 AACTTGCCCTCGGTGGGCTGCCGCGTGAGGAGCGAGTACGGTCCCCTCTGCCGCGTGTGC 448759 | || ||||| ||||||||||| |||| || |||||||| |||| |||| Sbjct 3928492 GATCGACCTTCGGTCGGCTGCCGCGTCAGGATCGCCATCGGTCCCCGAGCGCGCGAGTGC 3928433 Query 448760 ATCTTCTCCGAGGCCAGTTGCTTGAGGCTCTG 448791 ||||| ||| | ||| ||||| || | ||| Sbjct 3928432 ATCTTGTCCTGGACCATGTGCTTCAGCCGCTG 3928401 >seq5 Length=10013798 Score = 95.1 bits (104), Expect = 5e-14 Identities = 174/245 (71%), Gaps = 14/245 (6%) Strand=Plus/Minus Query 449006 GTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCGCCGGCC-GC 449064 ||||| |||||||| || || ||||| ||||||||||||||||| |||| || || Sbjct 5548159 GTCATTCGCGACGGAATCGCGTGAGGGTTGATGATGATGTCGGGCGTGACGCCCTCCCGC 5548100 Query 449065 GTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCG 449124 || ||||||||||||||| | | | || |||| || ||||||||| ||||| || Sbjct 5548099 GT-GAAGGGCATGTCCTCCTGCCGGTACGTCACGCCGATGGTGCCCTTCTGCCCGTGACG 5548041 Query 449125 -GCTGCAGAACTTGTCCCC---CTGCTCGGGCTTG--CGTGTGAAGCGCAGCACGATCTT 449178 | ||| |||||||| || |||| | |||| ||| ||| ||| |||| ||| Sbjct 5548040 CGAGGCA-AACTTGTCGCCGATCTGCGGGATCTTGGTCGTCCGAA-CGC-GCAC---CTT 5547987 Query 449179 GATGGAGCGGAAGCCGTCCCTGTTGGTGGTGTCGATGACCGACTCCACGACGGCGTCGTC 449238 || | | || | |||| ||| ||| |||||||||| || |||| | ||| || Sbjct 5547986 GACGTACTTGACGTTGTCCTGGTTCACCGTGACGATGACCGAGTCGACGATGCCGTTCTC 5547927 Query 449239 GGTGC 449243 ||||| Sbjct 5547926 GGTGC 5547922 Score = 91.5 bits (100), Expect = 6e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 349073 GCGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCG 349132 |||| || || ||||||| | ||||| |||| | || | | || || ||||||||||| Sbjct 5866470 GCGTTGATGATTTCCTTGATGCGGGGCACGCCCTGCGTGATGCTCATGCCCGCGACGCCG 5866529 Query 349133 GCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTG 349185 || || ||||| |||| ||| |||| ||||||| |||||||||||| |||| Sbjct 5866530 GCGAAATGGAACGTCTTGAGCGTCATCTGCGTGCCGGGCTCGCCGATCGACTG 5866582 Score = 89.7 bits (98), Expect = 2e-12 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 349078 GAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAA 349137 ||||||||| || | || || ||| |||||||||||||||||| || || || Sbjct 7946244 GAGAATCTCTCGCAGCCGAGGGATACCCGCCGTCACGTTCTTGGCCGCGTGCCCCGCCAA 7946185 Query 349138 GTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGAT 349197 |||||| || | ||| |||| |||||| |||||||| | | ||||||| |||| || Sbjct 7946184 GTGGAACGTGTTGAGCGTCATCTGCGTCGACGGCTCGCCCACGGACTGGCCGGCGACGAC 7946125 Query 349198 GCCTACCATCTCGCCGGGC 349216 ||| || |||||||||| Sbjct 7946124 GCCGACGGCCTCGCCGGGC 7946106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084737147834850