Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24] 28 sequences; 32,831,003 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq3 269 4e-70 seq1 131 3e-28 >seq3 Length=9751215 Score = 269 bits (298), Expect = 4e-70 Identities = 200/229 (87%), Gaps = 5/229 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| | Sbjct 3352307 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT-C 3352364 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | |||||| Sbjct 3352365 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGTGGTTTAACAAGATT 3352424 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| ||| ||||||||| || |||| || || ||||||||||||||||||| Sbjct 3352425 ACCCGGGCCTTCCGGCCAAGGGAGTA--CTCGCTGGCCACGTCAGTGTAGCGCGCGTGCG 3352482 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3352483 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 3352531 Score = 269 bits (298), Expect = 4e-70 Identities = 200/229 (87%), Gaps = 5/229 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| | Sbjct 3856249 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT-C 3856306 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | |||||| Sbjct 3856307 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGTGGTTTAACAAGATT 3856366 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| ||| ||||||||| || |||| || || ||||||||||||||||||| Sbjct 3856367 ACCCGGGCCTTCCGGCCAAGGGAGTA--CTCGCTGGCCACGTCAGTGTAGCGCGCGTGCG 3856424 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3856425 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 3856473 Score = 161 bits (178), Expect = 1e-37 Identities = 130/155 (84%), Gaps = 3/155 (2%) Strand=Plus/Minus Query 74 AACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTACCCGGACCTGTC 132 || |||| ||||| |||||||||| ||||| | | ||| | |||||||| ||| ||| | Sbjct 356062 AATAATTTCAATGCTCTATCCCCAGCACGACGTAGTTTAACAAGATTACTCGGGCCTTCC 356003 Query 133 GGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCT 192 |||||||| || |||| || || |||||||||||||||||||||||| ||||||| Sbjct 356002 GGCCAAGGGAGTA--CTCGCTGGCCACGTCAGTGTAGCGCGCGTGCGGCCCATAACATCT 355945 Query 193 AAGGGCATCACAGACCTGTTATTGCCTCAAACTTC 227 |||||||| |||||||||||||||||||||||||| Sbjct 355944 AAGGGCATTACAGACCTGTTATTGCCTCAAACTTC 355910 Score = 154 bits (170), Expect = 2e-35 Identities = 136/166 (82%), Gaps = 4/166 (2%) Strand=Plus/Minus Query 74 AACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTACCCGGACCTGTC 132 || |||| ||||| |||||||||| |||| | ||| | |||||||||||| ||| | Sbjct 310672 AATAATTTCAATGCTCTATCCCCAGTACGACGTGGTTTAATAAGATTACCCGGGCCTTCC 310613 Query 133 GGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCT 192 |||||||| || |||| || || ||||||||| |||||||||||||||||||||| Sbjct 310612 GGCCAAGGGAGTA--CTCGCTGGCCACGTCAGTGTAGTGCGCGTGCGGCCCAGAACATCT 310555 Query 193 AAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT-GGCCTAA 237 |||||||| ||| ||||||||||||||||||||||| | ||| ||| Sbjct 310554 AAGGGCATTACAAACCTGTTATTGCCTCAAACTTCCATCGGCTTAA 310509 >seq1 Length=12542233 Score = 131 bits (144), Expect = 3e-28 Identities = 98/114 (86%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 114 AAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCG 173 |||||||||||| ||| |||| |||| || |||| || || | | ||||||||| Sbjct 443610 AAGATTACCCGGGCCTTCCGGCTAAGGGAGTA--CTCGCTGGCCACGTTAATGTAGCGCG 443667 Query 174 CGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTC 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 443668 CGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTC 443721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751999796020