Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24]
28 sequences; 32,831,003 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq3 269 4e-70
seq1 131 3e-28
>seq3
Length=9751215
Score = 269 bits (298), Expect = 4e-70
Identities = 200/229 (87%), Gaps = 5/229 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| |
Sbjct 3352307 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT-C 3352364
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | ||||||
Sbjct 3352365 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGTGGTTTAACAAGATT 3352424
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||||| ||| ||||||||| || |||| || || |||||||||||||||||||
Sbjct 3352425 ACCCGGGCCTTCCGGCCAAGGGAGTA--CTCGCTGGCCACGTCAGTGTAGCGCGCGTGCG 3352482
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3352483 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 3352531
Score = 269 bits (298), Expect = 4e-70
Identities = 200/229 (87%), Gaps = 5/229 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| |
Sbjct 3856249 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT-C 3856306
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | ||||||
Sbjct 3856307 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGTGGTTTAACAAGATT 3856366
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||||| ||| ||||||||| || |||| || || |||||||||||||||||||
Sbjct 3856367 ACCCGGGCCTTCCGGCCAAGGGAGTA--CTCGCTGGCCACGTCAGTGTAGCGCGCGTGCG 3856424
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3856425 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 3856473
Score = 161 bits (178), Expect = 1e-37
Identities = 130/155 (84%), Gaps = 3/155 (2%)
Strand=Plus/Minus
Query 74 AACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTACCCGGACCTGTC 132
|| |||| ||||| |||||||||| ||||| | | ||| | |||||||| ||| ||| |
Sbjct 356062 AATAATTTCAATGCTCTATCCCCAGCACGACGTAGTTTAACAAGATTACTCGGGCCTTCC 356003
Query 133 GGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCT 192
|||||||| || |||| || || |||||||||||||||||||||||| |||||||
Sbjct 356002 GGCCAAGGGAGTA--CTCGCTGGCCACGTCAGTGTAGCGCGCGTGCGGCCCATAACATCT 355945
Query 193 AAGGGCATCACAGACCTGTTATTGCCTCAAACTTC 227
|||||||| ||||||||||||||||||||||||||
Sbjct 355944 AAGGGCATTACAGACCTGTTATTGCCTCAAACTTC 355910
Score = 154 bits (170), Expect = 2e-35
Identities = 136/166 (82%), Gaps = 4/166 (2%)
Strand=Plus/Minus
Query 74 AACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTACCCGGACCTGTC 132
|| |||| ||||| |||||||||| |||| | ||| | |||||||||||| ||| |
Sbjct 310672 AATAATTTCAATGCTCTATCCCCAGTACGACGTGGTTTAATAAGATTACCCGGGCCTTCC 310613
Query 133 GGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCT 192
|||||||| || |||| || || ||||||||| ||||||||||||||||||||||
Sbjct 310612 GGCCAAGGGAGTA--CTCGCTGGCCACGTCAGTGTAGTGCGCGTGCGGCCCAGAACATCT 310555
Query 193 AAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT-GGCCTAA 237
|||||||| ||| ||||||||||||||||||||||| | ||| |||
Sbjct 310554 AAGGGCATTACAAACCTGTTATTGCCTCAAACTTCCATCGGCTTAA 310509
>seq1
Length=12542233
Score = 131 bits (144), Expect = 3e-28
Identities = 98/114 (86%), Gaps = 2/114 (2%)
Strand=Plus/Plus
Query 114 AAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCG 173
|||||||||||| ||| |||| |||| || |||| || || | | |||||||||
Sbjct 443610 AAGATTACCCGGGCCTTCCGGCTAAGGGAGTA--CTCGCTGGCCACGTTAATGTAGCGCG 443667
Query 174 CGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTC 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 443668 CGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTC 443721
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751999796020
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |