Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24]
28 sequences; 32,831,003 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq3 352 5e-95
seq1 127 3e-27
>seq3
Length=9751215
Score = 352 bits (390), Expect = 5e-95
Identities = 236/259 (91%), Gaps = 3/259 (1%)
Strand=Plus/Plus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3856391 TACTCGCTGGCCACGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 3856450
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||||||||||||||| |||| || ||| ||||||||||||||||||||||
Sbjct 3856451 ACCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCAGC 3856509
Query 121 CACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179
| || || | || |||||||||||||||||||||||||||||||||||| ||||
Sbjct 3856510 GTACTGCCGGAG-CAATACGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATT 3856568
Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239
|| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 3856569 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 3856628
Query 240 AAAGAGCTATCAATCTGTC 258
|||||||| ||||||||||
Sbjct 3856629 AAAGAGCTCTCAATCTGTC 3856647
Score = 279 bits (308), Expect = 8e-73
Identities = 190/210 (90%), Gaps = 3/210 (1%)
Strand=Plus/Plus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3352449 TACTCGCTGGCCACGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 3352508
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||||||||||||||| |||| | |||| ||||||||||||||||||||||
Sbjct 3352509 ACCTGTTATTGCCTCAAACTTCCATCGGCTTG-AGCCGATAGTCCCTCTAAGAAGCCAGC 3352567
Query 121 CACCAACCATAGTCGAT-GGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179
| || || | || |||||||||||||||||||||||||||||||||||| ||||
Sbjct 3352568 GTACTGCCGGAG-CAATACGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATT 3352626
Query 180 AACCAGACAAATCACTCCACCAACTAAGAA 209
|| |||||||||||||||||||||||||||
Sbjct 3352627 AAGCAGACAAATCACTCCACCAACTAAGAA 3352656
Score = 131 bits (144), Expect = 3e-28
Identities = 83/90 (92%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| |||| ||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct 310601 TACTCGCTGGCCACGTCAGTGTAGTGCGCGTGCGGCCCAGAACATCTAAGGGCATTACAA 310542
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCT 90
||||||||||||||||||||||||| ||||
Sbjct 310541 ACCTGTTATTGCCTCAAACTTCCATCGGCT 310512
Score = 131 bits (144), Expect = 3e-28
Identities = 83/90 (92%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| |||| |||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct 355991 TACTCGCTGGCCACGTCAGTGTAGCGCGCGTGCGGCCCATAACATCTAAGGGCATTACAG 355932
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCT 90
|||||||||||||||||||||| || ||||
Sbjct 355931 ACCTGTTATTGCCTCAAACTTCTATCGGCT 355902
>seq1
Length=12542233
Score = 127 bits (140), Expect = 3e-27
Identities = 79/85 (93%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| |||| ||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct 443640 TACTCGCTGGCCACGTTAATGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 443699
Query 61 ACCTGTTATTGCCTCAAACTTCCAT 85
|||||||||||||||||||||| ||
Sbjct 443700 ACCTGTTATTGCCTCAAACTTCTAT 443724
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796799783868
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |