Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24] 28 sequences; 32,831,003 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq3 352 5e-95 seq1 127 3e-27 >seq3 Length=9751215 Score = 352 bits (390), Expect = 5e-95 Identities = 236/259 (91%), Gaps = 3/259 (1%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3856391 TACTCGCTGGCCACGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 3856450 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||||||||||||| |||| || ||| |||||||||||||||||||||| Sbjct 3856451 ACCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCAGC 3856509 Query 121 CACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 | || || | || |||||||||||||||||||||||||||||||||||| |||| Sbjct 3856510 GTACTGCCGGAG-CAATACGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATT 3856568 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 3856569 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 3856628 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| |||||||||| Sbjct 3856629 AAAGAGCTCTCAATCTGTC 3856647 Score = 279 bits (308), Expect = 8e-73 Identities = 190/210 (90%), Gaps = 3/210 (1%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3352449 TACTCGCTGGCCACGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 3352508 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||||||||||||| |||| | |||| |||||||||||||||||||||| Sbjct 3352509 ACCTGTTATTGCCTCAAACTTCCATCGGCTTG-AGCCGATAGTCCCTCTAAGAAGCCAGC 3352567 Query 121 CACCAACCATAGTCGAT-GGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 | || || | || |||||||||||||||||||||||||||||||||||| |||| Sbjct 3352568 GTACTGCCGGAG-CAATACGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATT 3352626 Query 180 AACCAGACAAATCACTCCACCAACTAAGAA 209 || ||||||||||||||||||||||||||| Sbjct 3352627 AAGCAGACAAATCACTCCACCAACTAAGAA 3352656 Score = 131 bits (144), Expect = 3e-28 Identities = 83/90 (92%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||| ||||||||||| |||||||||||||||||||||||||||||| ||| Sbjct 310601 TACTCGCTGGCCACGTCAGTGTAGTGCGCGTGCGGCCCAGAACATCTAAGGGCATTACAA 310542 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCT 90 ||||||||||||||||||||||||| |||| Sbjct 310541 ACCTGTTATTGCCTCAAACTTCCATCGGCT 310512 Score = 131 bits (144), Expect = 3e-28 Identities = 83/90 (92%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||| |||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct 355991 TACTCGCTGGCCACGTCAGTGTAGCGCGCGTGCGGCCCATAACATCTAAGGGCATTACAG 355932 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCT 90 |||||||||||||||||||||| || |||| Sbjct 355931 ACCTGTTATTGCCTCAAACTTCTATCGGCT 355902 >seq1 Length=12542233 Score = 127 bits (140), Expect = 3e-27 Identities = 79/85 (93%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||| ||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct 443640 TACTCGCTGGCCACGTTAATGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 443699 Query 61 ACCTGTTATTGCCTCAAACTTCCAT 85 |||||||||||||||||||||| || Sbjct 443700 ACCTGTTATTGCCTCAAACTTCTAT 443724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796799783868