Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24]
28 sequences; 32,831,003 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq3 419 4e-115
seq1 158 2e-36
>seq3
Length=9751215
Score = 419 bits (464), Expect = 4e-115
Identities = 280/309 (91%), Gaps = 2/309 (1%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||| | ||| ||| | ||| ||||||||||
Sbjct 3352614 GAACGAGACCTTAACCTGCTAAATAGCCCGTATTGCTCCGGCAGTACGCTGGCTTCTTAG 3352555
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3352554 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 3352495
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
|||||||||||||||||||||||||||||||| |||| ||||| | || |||||||||
Sbjct 3352494 GATGTTCTGGGCCGCACGCGCGCTACACTGACGTGGCCAGCGAGTAC-TC-CCTTGGCCG 3352437
Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259
||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 3352436 GAAGGCCCGGGTAATCTTGTTAAACCACGTCGTGCTGGGGATAGAGCATTGCAATTATTG 3352377
Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319
|||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||
Sbjct 3352376 CTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTG 3352317
Query 320 CCCTTTGTA 328
|||||||||
Sbjct 3352316 CCCTTTGTA 3352308
Score = 419 bits (464), Expect = 4e-115
Identities = 280/309 (91%), Gaps = 2/309 (1%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||| | ||| ||| | ||| ||||||||||
Sbjct 3856556 GAACGAGACCTTAACCTGCTAAATAGCCCGTATTGCTCCGGCAGTACGCTGGCTTCTTAG 3856497
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3856496 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 3856437
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
|||||||||||||||||||||||||||||||| |||| ||||| | || |||||||||
Sbjct 3856436 GATGTTCTGGGCCGCACGCGCGCTACACTGACGTGGCCAGCGAGTAC-TC-CCTTGGCCG 3856379
Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259
||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 3856378 GAAGGCCCGGGTAATCTTGTTAAACCACGTCGTGCTGGGGATAGAGCATTGCAATTATTG 3856319
Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319
|||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||
Sbjct 3856318 CTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTG 3856259
Query 320 CCCTTTGTA 328
|||||||||
Sbjct 3856258 CCCTTTGTA 3856250
Score = 215 bits (238), Expect = 1e-53
Identities = 147/163 (90%), Gaps = 2/163 (1%)
Strand=Plus/Plus
Query 96 AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCA 155
||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct 355902 AGCCGATAGAAGTTTGAGGCAATAACAGGTCTGTAATGCCCTTAGATGTTATGGGCCGCA 355961
Query 156 CGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATC 215
|||||||||||||||| |||| ||||| | || |||||||||||||| | | ||||||
Sbjct 355962 CGCGCGCTACACTGACGTGGCCAGCGAGTAC-TC-CCTTGGCCGGAAGGCCCGAGTAATC 356019
Query 216 TTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258
|||||||||| ||||||||||||||||||||||| |||||||
Sbjct 356020 TTGTTAAACTACGTCGTGCTGGGGATAGAGCATTGAAATTATT 356062
Score = 208 bits (230), Expect = 1e-51
Identities = 146/164 (89%), Gaps = 2/164 (1%)
Strand=Plus/Plus
Query 95 AAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGC 154
||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct 310511 AAGCCGATGGAAGTTTGAGGCAATAACAGGTTTGTAATGCCCTTAGATGTTCTGGGCCGC 310570
Query 155 ACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAAT 214
|||||| |||||||||| |||| ||||| | || |||||||||||||| | |||||||
Sbjct 310571 ACGCGCACTACACTGACGTGGCCAGCGAGTAC-TC-CCTTGGCCGGAAGGCCCGGGTAAT 310628
Query 215 CTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258
||| |||||| ||||| ||||||||||||||||| |||||||
Sbjct 310629 CTTATTAAACCACGTCGTACTGGGGATAGAGCATTGAAATTATT 310672
>seq1
Length=12542233
Score = 158 bits (174), Expect = 2e-36
Identities = 114/129 (88%), Gaps = 2/129 (2%)
Strand=Plus/Minus
Query 93 TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCC 152
|||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 443732 TCAATACGATAGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCC 443673
Query 153 GCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTA 212
|||||||||||||| | || |||| ||||| | || |||| ||||||||| | |||||
Sbjct 443672 GCACGCGCGCTACATTAACGTGGCCAGCGAGTAC-TC-CCTTAGCCGGAAGGCCCGGGTA 443615
Query 213 ATCTTGTTA 221
|||||||||
Sbjct 443614 ATCTTGTTA 443606
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947199734784
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |