Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24] 28 sequences; 32,831,003 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq3 419 4e-115 seq1 158 2e-36 >seq3 Length=9751215 Score = 419 bits (464), Expect = 4e-115 Identities = 280/309 (91%), Gaps = 2/309 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||| | ||| ||| | ||| |||||||||| Sbjct 3352614 GAACGAGACCTTAACCTGCTAAATAGCCCGTATTGCTCCGGCAGTACGCTGGCTTCTTAG 3352555 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3352554 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 3352495 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 |||||||||||||||||||||||||||||||| |||| ||||| | || ||||||||| Sbjct 3352494 GATGTTCTGGGCCGCACGCGCGCTACACTGACGTGGCCAGCGAGTAC-TC-CCTTGGCCG 3352437 Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259 ||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 3352436 GAAGGCCCGGGTAATCTTGTTAAACCACGTCGTGCTGGGGATAGAGCATTGCAATTATTG 3352377 Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319 |||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||| Sbjct 3352376 CTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTG 3352317 Query 320 CCCTTTGTA 328 ||||||||| Sbjct 3352316 CCCTTTGTA 3352308 Score = 419 bits (464), Expect = 4e-115 Identities = 280/309 (91%), Gaps = 2/309 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||| | ||| ||| | ||| |||||||||| Sbjct 3856556 GAACGAGACCTTAACCTGCTAAATAGCCCGTATTGCTCCGGCAGTACGCTGGCTTCTTAG 3856497 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3856496 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 3856437 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 |||||||||||||||||||||||||||||||| |||| ||||| | || ||||||||| Sbjct 3856436 GATGTTCTGGGCCGCACGCGCGCTACACTGACGTGGCCAGCGAGTAC-TC-CCTTGGCCG 3856379 Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259 ||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 3856378 GAAGGCCCGGGTAATCTTGTTAAACCACGTCGTGCTGGGGATAGAGCATTGCAATTATTG 3856319 Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319 |||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||| Sbjct 3856318 CTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTG 3856259 Query 320 CCCTTTGTA 328 ||||||||| Sbjct 3856258 CCCTTTGTA 3856250 Score = 215 bits (238), Expect = 1e-53 Identities = 147/163 (90%), Gaps = 2/163 (1%) Strand=Plus/Plus Query 96 AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCA 155 ||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct 355902 AGCCGATAGAAGTTTGAGGCAATAACAGGTCTGTAATGCCCTTAGATGTTATGGGCCGCA 355961 Query 156 CGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATC 215 |||||||||||||||| |||| ||||| | || |||||||||||||| | | |||||| Sbjct 355962 CGCGCGCTACACTGACGTGGCCAGCGAGTAC-TC-CCTTGGCCGGAAGGCCCGAGTAATC 356019 Query 216 TTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 |||||||||| ||||||||||||||||||||||| ||||||| Sbjct 356020 TTGTTAAACTACGTCGTGCTGGGGATAGAGCATTGAAATTATT 356062 Score = 208 bits (230), Expect = 1e-51 Identities = 146/164 (89%), Gaps = 2/164 (1%) Strand=Plus/Plus Query 95 AAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGC 154 ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct 310511 AAGCCGATGGAAGTTTGAGGCAATAACAGGTTTGTAATGCCCTTAGATGTTCTGGGCCGC 310570 Query 155 ACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAAT 214 |||||| |||||||||| |||| ||||| | || |||||||||||||| | ||||||| Sbjct 310571 ACGCGCACTACACTGACGTGGCCAGCGAGTAC-TC-CCTTGGCCGGAAGGCCCGGGTAAT 310628 Query 215 CTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 ||| |||||| ||||| ||||||||||||||||| ||||||| Sbjct 310629 CTTATTAAACCACGTCGTACTGGGGATAGAGCATTGAAATTATT 310672 >seq1 Length=12542233 Score = 158 bits (174), Expect = 2e-36 Identities = 114/129 (88%), Gaps = 2/129 (2%) Strand=Plus/Minus Query 93 TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCC 152 |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 443732 TCAATACGATAGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCC 443673 Query 153 GCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTA 212 |||||||||||||| | || |||| ||||| | || |||| ||||||||| | ||||| Sbjct 443672 GCACGCGCGCTACATTAACGTGGCCAGCGAGTAC-TC-CCTTAGCCGGAAGGCCCGGGTA 443615 Query 213 ATCTTGTTA 221 ||||||||| Sbjct 443614 ATCTTGTTA 443606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947199734784