Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24]
28 sequences; 32,831,003 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq3 228 1e-57
>seq3
Length=9751215
Score = 228 bits (252), Expect = 1e-57
Identities = 222/278 (80%), Gaps = 6/278 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 3348671 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 3348614
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 3348613 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 3348554
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| || ||| | | || |||| | || |||| |||||||||||||| |
Sbjct 3348553 GAACGCGGCGATAC-CGCCCGCACGT-ACAGACGGACCAGAATAGGCTTCGGCTTAGTGT 3348496
Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGCA 240
|| ||||||| ||| | | | |||||||| | | || | ||| |||| |
Sbjct 3348495 CTCAGCAGGCGATTCCTCCGCGGCGCTC-GAAGCGCGCCGTG-GCAATTCGCGTATTGTA 3348438
Query 241 ATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|||||| || | || ||| ||||||||||||||||||
Sbjct 3348437 ATTTCAGCACGAGCGGGGTCAAATCCTTTGCAGACGAC 3348400
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819199777792
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |