Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24]
28 sequences; 32,831,003 total letters
Query= NC_027867.1
Length=651523
Score E
Sequences producing significant alignments: (Bits) Value
seq3 104 1e-16
seq1 100 1e-15
seq2 91.5 6e-13
>seq3
Length=9751215
Score = 104 bits (114), Expect = 1e-16
Identities = 105/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 349079 AGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAG 349138
|| || || || || | ||||| ||| || || |||||||| | || || ||||| ||
Sbjct 2866546 AGGATTTCTTTCAGCCGGGGCACGCCGAGCGTGACGTTCTTCGACGACACACCGGCGAAA 2866605
Query 349139 TGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATG 349198
|||||||| | ||| |||| |||||| ||||||||||||| |||| ||||||| |
Sbjct 2866606 TGGAAGGTGTTGAGCGTCATCTGCGTCGCGGGCTCGCCGATGGACTGCGCCGCGAGAACA 2866665
Query 349199 CCTACCATCTCGCCGGG 349215
|| |||||||| |||||
Sbjct 2866666 CCAACCATCTCACCGGG 2866682
>seq1
Length=12542233
Score = 100 bits (110), Expect = 1e-15
Identities = 121/165 (73%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 448988 TCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCG 449047
||||||| | || || ||||| ||||||||| | | ||||||||||||||||||||
Sbjct 9134068 TCGAGCAGCTTGCCGACCGTCATTCGCGACGGGAAACCGTGCGGGTTCATGATGATGTCC 9134009
Query 449048 GGCGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACG 449107
||||| ||| || ||| |||||||| || ||| || | || || |||
Sbjct 9134008 GGCGTGAGCCCGTTGTCGGCGAACGGCATGTCTTCCTGGTCCACGATGAGCCCCACCACG 9133949
Query 449108 CCCTTCTGGCCGTGGCGGCTGCAGAACTTGTCCCCCTGCTCGGGC 449152
|||||||||||||||||| |||||||||| || |||| |||
Sbjct 9133948 CCCTTCTGGCCGTGGCGGGACGAGAACTTGTCACCGAGCTCCGGC 9133904
Score = 89.7 bits (98), Expect = 2e-12
Identities = 103/139 (74%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 349078 GAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAA 349137
||||||||| || | || || ||| |||||||||||||||||| || || ||
Sbjct 8151355 GAGAATCTCTCGCAGCCGAGGGATACCCGCCGTCACGTTCTTGGCCGCGTGCCCCGCCAA 8151296
Query 349138 GTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGAT 349197
|||||| || | ||| |||| |||||| |||||||| | | ||||||| |||| ||
Sbjct 8151295 GTGGAACGTGTTGAGCGTCATCTGCGTCGACGGCTCGCCCACGGACTGGCCGGCGACGAC 8151236
Query 349198 GCCTACCATCTCGCCGGGC 349216
||| || ||||||||||
Sbjct 8151235 GCCGACGGCCTCGCCGGGC 8151217
Score = 89.7 bits (98), Expect = 2e-12
Identities = 111/152 (73%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 448640 GCGCCGTAGGACTTGAAGGAGACGCGCTCCATGTCGCCCAATCGGAGCCCGCCGTGTCGC 448699
|||||||| | ||| | || |||||||||| |||||||| ||||| ||||||| ||
Sbjct 9134419 GCGCCGTACGCGATGAGGCAGTCGCGCTCCATCTCGCCCAACCGGAGGCCGCCGTCCCGT 9134360
Query 448700 AACTTGCCCTCGGTGGGCTGCCGCGTGAGGAGCGAGTACGGTCCCCTCTGCCGCGTGTGC 448759
| || ||||| ||||||||||| |||| || |||||||| |||| ||||
Sbjct 9134359 GATCGACCTTCGGTCGGCTGCCGCGTCAGGATCGCCATCGGTCCCCGAGCGCGCGAGTGC 9134300
Query 448760 ATCTTCTCCGAGGCCAGTTGCTTGAGGCTCTG 448791
||||| ||| | ||| ||||| || | |||
Sbjct 9134299 ATCTTGTCCTGGACCATGTGCTTCAGCCGCTG 9134268
>seq2
Length=10204147
Score = 91.5 bits (100), Expect = 6e-13
Identities = 88/113 (78%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 349073 GCGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCG 349132
|||| || || ||||||| | ||||| |||| | || | | || || |||||||||||
Sbjct 7109894 GCGTTGATGATTTCCTTGATGCGGGGCACGCCCTGCGTGATGCTCATGCCCGCGACGCCG 7109835
Query 349133 GCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTG 349185
|| || ||||| |||| ||| |||| ||||||| |||||||||||| ||||
Sbjct 7109834 GCGAAATGGAACGTCTTGAGCGTCATCTGCGTGCCGGGCTCGCCGATCGACTG 7109782
Score = 89.7 bits (98), Expect = 2e-12
Identities = 173/245 (71%), Gaps = 14/245 (6%)
Strand=Plus/Plus
Query 449006 GTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCG-CCGGCCGC 449064
||||| |||||||| || || ||||| ||||||||||||||||| || || ||||
Sbjct 7430512 GTCATTCGCGACGGAATCGCGTGAGGGTTGATGATGATGTCGGGCGTGACGCCCTCCCGC 7430571
Query 449065 GTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCG 449124
| |||||||||||||||| | | | || |||| | ||||||||| ||||| ||
Sbjct 7430572 G-TGAAGGGCATGTCCTCCTGCCGGTACGTCACGCCGATAGTGCCCTTCTGCCCGTGACG 7430630
Query 449125 -GCTGCAGAACTTGTCCCC---CTGCTCGGGCTTG--CGTGTGAAGCGCAGCACGATCTT 449178
| ||| |||||||| || |||| | |||| ||| ||| ||| |||| |||
Sbjct 7430631 CGAGGCA-AACTTGTCGCCGATCTGCGGGATCTTGGTCGTCCGAA-CGC-GCAC---CTT 7430684
Query 449179 GATGGAGCGGAAGCCGTCCCTGTTGGTGGTGTCGATGACCGACTCCACGACGGCGTCGTC 449238
|| | | || | |||| ||| ||| |||||||||| || |||| | ||| ||
Sbjct 7430685 GACGTACTTGACGTTGTCCTGGTTCACCGTGACGATGACCGAGTCGACGATGCCGTTCTC 7430744
Query 449239 GGTGC 449243
|||||
Sbjct 7430745 GGTGC 7430749
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2084738433858344
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |