Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24] 28 sequences; 32,831,003 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq3 104 1e-16 seq1 100 1e-15 seq2 91.5 6e-13 >seq3 Length=9751215 Score = 104 bits (114), Expect = 1e-16 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 349079 AGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAG 349138 || || || || || | ||||| ||| || || |||||||| | || || ||||| || Sbjct 2866546 AGGATTTCTTTCAGCCGGGGCACGCCGAGCGTGACGTTCTTCGACGACACACCGGCGAAA 2866605 Query 349139 TGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATG 349198 |||||||| | ||| |||| |||||| ||||||||||||| |||| ||||||| | Sbjct 2866606 TGGAAGGTGTTGAGCGTCATCTGCGTCGCGGGCTCGCCGATGGACTGCGCCGCGAGAACA 2866665 Query 349199 CCTACCATCTCGCCGGG 349215 || |||||||| ||||| Sbjct 2866666 CCAACCATCTCACCGGG 2866682 >seq1 Length=12542233 Score = 100 bits (110), Expect = 1e-15 Identities = 121/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 448988 TCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCG 449047 ||||||| | || || ||||| ||||||||| | | |||||||||||||||||||| Sbjct 9134068 TCGAGCAGCTTGCCGACCGTCATTCGCGACGGGAAACCGTGCGGGTTCATGATGATGTCC 9134009 Query 449048 GGCGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACG 449107 ||||| ||| || ||| |||||||| || ||| || | || || ||| Sbjct 9134008 GGCGTGAGCCCGTTGTCGGCGAACGGCATGTCTTCCTGGTCCACGATGAGCCCCACCACG 9133949 Query 449108 CCCTTCTGGCCGTGGCGGCTGCAGAACTTGTCCCCCTGCTCGGGC 449152 |||||||||||||||||| |||||||||| || |||| ||| Sbjct 9133948 CCCTTCTGGCCGTGGCGGGACGAGAACTTGTCACCGAGCTCCGGC 9133904 Score = 89.7 bits (98), Expect = 2e-12 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 349078 GAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAA 349137 ||||||||| || | || || ||| |||||||||||||||||| || || || Sbjct 8151355 GAGAATCTCTCGCAGCCGAGGGATACCCGCCGTCACGTTCTTGGCCGCGTGCCCCGCCAA 8151296 Query 349138 GTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGAT 349197 |||||| || | ||| |||| |||||| |||||||| | | ||||||| |||| || Sbjct 8151295 GTGGAACGTGTTGAGCGTCATCTGCGTCGACGGCTCGCCCACGGACTGGCCGGCGACGAC 8151236 Query 349198 GCCTACCATCTCGCCGGGC 349216 ||| || |||||||||| Sbjct 8151235 GCCGACGGCCTCGCCGGGC 8151217 Score = 89.7 bits (98), Expect = 2e-12 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 448640 GCGCCGTAGGACTTGAAGGAGACGCGCTCCATGTCGCCCAATCGGAGCCCGCCGTGTCGC 448699 |||||||| | ||| | || |||||||||| |||||||| ||||| ||||||| || Sbjct 9134419 GCGCCGTACGCGATGAGGCAGTCGCGCTCCATCTCGCCCAACCGGAGGCCGCCGTCCCGT 9134360 Query 448700 AACTTGCCCTCGGTGGGCTGCCGCGTGAGGAGCGAGTACGGTCCCCTCTGCCGCGTGTGC 448759 | || ||||| ||||||||||| |||| || |||||||| |||| |||| Sbjct 9134359 GATCGACCTTCGGTCGGCTGCCGCGTCAGGATCGCCATCGGTCCCCGAGCGCGCGAGTGC 9134300 Query 448760 ATCTTCTCCGAGGCCAGTTGCTTGAGGCTCTG 448791 ||||| ||| | ||| ||||| || | ||| Sbjct 9134299 ATCTTGTCCTGGACCATGTGCTTCAGCCGCTG 9134268 >seq2 Length=10204147 Score = 91.5 bits (100), Expect = 6e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 349073 GCGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCG 349132 |||| || || ||||||| | ||||| |||| | || | | || || ||||||||||| Sbjct 7109894 GCGTTGATGATTTCCTTGATGCGGGGCACGCCCTGCGTGATGCTCATGCCCGCGACGCCG 7109835 Query 349133 GCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTG 349185 || || ||||| |||| ||| |||| ||||||| |||||||||||| |||| Sbjct 7109834 GCGAAATGGAACGTCTTGAGCGTCATCTGCGTGCCGGGCTCGCCGATCGACTG 7109782 Score = 89.7 bits (98), Expect = 2e-12 Identities = 173/245 (71%), Gaps = 14/245 (6%) Strand=Plus/Plus Query 449006 GTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCG-CCGGCCGC 449064 ||||| |||||||| || || ||||| ||||||||||||||||| || || |||| Sbjct 7430512 GTCATTCGCGACGGAATCGCGTGAGGGTTGATGATGATGTCGGGCGTGACGCCCTCCCGC 7430571 Query 449065 GTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCG 449124 | |||||||||||||||| | | | || |||| | ||||||||| ||||| || Sbjct 7430572 G-TGAAGGGCATGTCCTCCTGCCGGTACGTCACGCCGATAGTGCCCTTCTGCCCGTGACG 7430630 Query 449125 -GCTGCAGAACTTGTCCCC---CTGCTCGGGCTTG--CGTGTGAAGCGCAGCACGATCTT 449178 | ||| |||||||| || |||| | |||| ||| ||| ||| |||| ||| Sbjct 7430631 CGAGGCA-AACTTGTCGCCGATCTGCGGGATCTTGGTCGTCCGAA-CGC-GCAC---CTT 7430684 Query 449179 GATGGAGCGGAAGCCGTCCCTGTTGGTGGTGTCGATGACCGACTCCACGACGGCGTCGTC 449238 || | | || | |||| ||| ||| |||||||||| || |||| | ||| || Sbjct 7430685 GACGTACTTGACGTTGTCCTGGTTCACCGTGACGATGACCGAGTCGACGATGCCGTTCTC 7430744 Query 449239 GGTGC 449243 ||||| Sbjct 7430745 GGTGC 7430749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084738433858344