Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08- 04] 8,670 sequences; 54,153,615 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq8670 217 2e-54 seq7850 120 5e-25 >seq8670 Length=8198 Score = 217 bits (240), Expect = 2e-54 Identities = 188/229 (82%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| || | | |||| | ||||| | || ||||||| ||| | Sbjct 3496 GTACAAAGGGCAGGGACGTAATCGGCACAAGCTGG-TGACTTGTGCCTACTAGGCATT-C 3439 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| ||| | |||||| Sbjct 3438 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGGGTTTAACAAGATT 3379 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||| | ||| |||||| |||||| ||||| || ||||||||||||||||||| Sbjct 3378 ACCACGGCCTCTCGGCCTAGGTGAAGCACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCG 3319 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct 3318 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCGCGCACTTCC 3270 >seq7850 Length=1107 Score = 120 bits (132), Expect = 5e-25 Identities = 98/117 (84%), Gaps = 3/117 (3%) Strand=Plus/Minus Query 90 TATCCCCATCACGATGAAATTTCA-AAGATTACCCGGACCTGTCGGCCAAGGTGATAGAC 148 |||||||| ||||| | | ||| | |||||||||||| ||| ||||||||| || | Sbjct 1107 TATCCCCAGCACGACGGAGTTTAACAAGATTACCCGGGCCTTCCGGCCAAGGGAGTA--C 1050 Query 149 TCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 205 ||| || | | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1049 TCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751936839050