Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08- 04] 8,670 sequences; 54,153,615 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq8670 838 0.0 seq7591 356 1e-95 >seq8670 Length=8198 Score = 838 bits (928), Expect = 0.0 Identities = 599/684 (88%), Gaps = 6/684 (1%) Strand=Plus/Plus Query 6 GACCGGTGGCCTAGCC-GTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGC 64 |||||||| | ||| | |||||||||| |||||||||||||||||||||||||||||| Sbjct 4485 GACCGGTGACTGGGCCTGGGTGAAGCTCCCTCGACGAGTCGAGTTGTTTGGGAATGCAGC 4544 Query 65 TCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACA 124 |||||||||| |||||||||| ||||||||||||||| |||| ||||||||||||||||| Sbjct 4545 TCTAAATGGGTGGTAAATTTCATCTAAAGCTAAATATGGGCCGGAGACCGATAGCGCACA 4604 Query 125 AGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATT 184 |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct 4605 AGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTCAAACAGCACGTGAAATT 4664 Query 185 GTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCC 244 |||||||||||||||||||| | |||||| ||||| | | ||| ||||| | | ||| Sbjct 4665 GTTGAAAGGGAAGCGCTTGCGATCAGACTCGCCCGGGGAGGTTCAGCCGGCACTTGTGCC 4724 Query 245 GGTGCACTCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGA 304 |||||| || | ||| | ||||||| || | | || || | | ||||||||| ||| Sbjct 4725 GGTGCATTCCTACCCGGGCGGGCCAGCGTCGGTTTGGATGGCCTGTCAAAGGCCCCCGGA 4784 Query 305 ATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAG 364 | || || |||||||||| || |||||||| |||||| |||||||| | | |||| ||| Sbjct 4785 AGGTAGCGCCCTTCGGGGCGTCTTATAGCCGGGGGTGTCATGCGGCCTGTCCGGACCGAG 4844 Query 365 GTCCGCGC--TCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACAC 422 | ||||| | |||| ||| |||||||||||||| ||||||||||||||||| ||||| Sbjct 4845 GAACGCGCCTTTGGGCTCGGACGCTGGCGTAATGGTCGTAAGCGGCCCGTCTTGAAACAC 4904 Query 423 GGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGT--CAAACCCGTGCGCGTAATG 480 |||||||||||||||||||| | ||||||||| |||||| |||||||| |||| | || Sbjct 4905 GGACCAAGGAGTCTAACATCCACGCGAGTGTTCGGGTGTTCAAAACCCGTCCGCGCAGTG 4964 Query 481 AAAGTGAACGGAGGTGGGAA-CCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCG 539 |||| ||||||||||||||| ||| | |||||||||||||||||||||||||||||||| Sbjct 4965 AAAGCGAACGGAGGTGGGAACCCCCTTGGGGTGCACCATCGACCGATCCTGATGTCTTCG 5024 Query 540 GATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAAT 599 |||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||| Sbjct 5025 GATGGATTTGAGTAGGAGCGTGGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAAT 5084 Query 600 AGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGAT 659 |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 5085 AGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGAT 5144 Query 660 CGTCAAATTTGGGTATAGGGGCGA 683 |||||||||||||||||||||||| Sbjct 5145 CGTCAAATTTGGGTATAGGGGCGA 5168 >seq7591 Length=1485 Score = 356 bits (394), Expect = 1e-95 Identities = 332/415 (80%), Gaps = 18/415 (4%) Strand=Plus/Plus Query 272 ATCAGCTCGG-GCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTAT 330 ||||| ||| |||| ||||||| || |||||| ||||| |||| ||| ||||||| Sbjct 971 ATCAGTTCGCCGCGGG-GGATAAAAGCTTCGGGAACGTGGCTCCCTC--GGGAGTGTTAT 1027 Query 331 AGCCCGGGGTGGAATGCGGCCCGCC-TGGACTGAGGTCCGCGCTCCGGCTAGGATGCTGG 389 |||||| | ||| | || || ||||||||||| ||||||||| | |||||||||| Sbjct 1028 AGCCCGTTGCACAATAC--CCTGCGGTGGACTGAGGTTCGCGCTCCG-CAAGGATGCTGG 1084 Query 390 CGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATC-TATGCG 448 ||||||||| | |||| ||||||||| |||||||||||||||||| | || |||||| Sbjct 1085 CGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCAAGGAGTCGT-CTTCGTATGCG 1143 Query 449 AGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAG 508 |||||| ||||||||||||| | ||||||||||||||||||| ||||| || | Sbjct 1144 AGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAGAGCTTC---- 1199 Query 509 GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTG 568 || ||| ||||||||||||||||||| ||||||||||||||||||||||||| | Sbjct 1200 GGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAAGAGCATACGGGGCC 1259 Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1260 GGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAGCCAGAGGAAACTCTGGTGG- 1318 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || ||||||||||||||||||||| |||| || ||||||| Sbjct 1319 ---NNNNNNNNNNNNTGACGTGCAAATCGATCGTCAAATATGGGCATGGGGGCGA 1370 Score = 179 bits (198), Expect = 2e-42 Identities = 112/119 (94%), Gaps = 1/119 (1%) Strand=Plus/Plus Query 14 GCCTAGCC-GTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATG 72 ||| |||| |||| |||||||||||||||||||||| |||||||||||| |||||||||| Sbjct 726 GCCAAGCCAGTGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATG 785 Query 73 GGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAG 131 ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 786 GGAGGTATATGTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAG 844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079814028500